Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC117394.1-201ENST00000477323 567 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AC108941.1-201ENST00000502853 530 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC024589.1-201ENST00000512207 263 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 RNA5SP473-201ENST00000516402 125 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AP006245.2-201ENST00000522004 300 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 CENPUP1-201ENST00000526649 1202 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AC123904.3-201ENST00000547218 814 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 MRPS21P7-201ENST00000566937 238 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC008507.1-201ENST00000587506 734 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC112220.3-201ENST00000605502 502 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 AP000238.1-201ENST00000608759 426 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AL357080.1-201ENST00000617394 239 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AL136221.1-201ENST00000621449 509 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AP003400.3-201ENST00000624904 346 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 PCAT14-202ENST00000627127 3935 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC004817.4-201ENST00000602396 3625 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS11Q9H270 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AL034370.1-201ENST00000397254 1590 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
VPS11Q9H270 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 OR9G4-201ENST00000302957 984 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS11Q9H270 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 OR1L1-202ENST00000373686 1083 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 RNU6-692P-201ENST00000384496 107 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 Y_RNA.509-201ENST00000384506 99 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AL079342.2-201ENST00000403367 482 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AL590002.1-201ENST00000406554 418 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 SNORA11.5-201ENST00000408163 128 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 CYCSP46-201ENST00000423569 204 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC012498.1-201ENST00000424037 437 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 OR8F1P-201ENST00000425243 930 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 NANOGP4-201ENST00000427230 913 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AC000111.3-201ENST00000433478 193 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS11Q9H270 MTCO3P18-201ENST00000440206 761 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS11Q9H270 SNRPGP9-201ENST00000456025 225 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 RPL7P1-201ENST00000468161 747 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 RPL7P9-201ENST00000468715 747 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VPS11Q9H270 GAPDHP36-201ENST00000480688 918 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC091951.2-201ENST00000500762 203 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC008628.2-201ENST00000502605 298 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AC109481.1-201ENST00000509173 282 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 SNORA20.3-201ENST00000516880 132 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 SNORA43.3-201ENST00000517240 103 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 IGBP1P1-201ENST00000554337 1009 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 OR11J2P-201ENST00000555298 907 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 ZNF519P2-201ENST00000557032 169 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC044913.1-201ENST00000557200 430 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AC022884.2-201ENST00000578535 580 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS11Q9H270 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS11Q9H270 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS11Q9H270 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms