Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 GMFBP1-201ENST00000467831 427 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RN7SL459P-201ENST00000481078 302 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC020890.1-201ENST00000491837 504 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RPSAP51-201ENST00000497462 645 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 MTCO3P44-201ENST00000510977 541 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.661-201ENST00000516003 99 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RNU6-566P-201ENST00000516790 107 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RNU6-273P-201ENST00000516937 96 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 IGHVIII-67-3-201ENST00000517650 232 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC027309.2-201ENST00000520566 192 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 SUMO2P20-201ENST00000520803 283 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC022616.3-201ENST00000523940 148 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 BNIP3P1-201ENST00000547295 580 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AL049872.1-201ENST00000556323 322 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC010323.2-201ENST00000596405 594 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AL022099.1-201ENST00000604551 712 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 FAM27E4-201ENST00000605259 342 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AP004247.3-201ENST00000608682 624 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 MIR6128-201ENST00000615528 109 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 AC015967.1-201ENST00000619893 476 ntBASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
COL25A1Q9BXS0 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 AC020658.2-201ENST00000559030 4020 ntBASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC6.4□□□□□ -1.39
COL25A1Q9BXS0 AL158163.1-201ENST00000603915 1649 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 RNU1-32P-201ENST00000363937 159 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 Y_RNA.482-201ENST00000384377 111 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 RNA5SP156-201ENST00000410250 110 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 HMGA1P8-201ENST00000414130 321 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AL590806.1-201ENST00000415818 853 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC114814.2-201ENST00000419195 485 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AL590135.1-201ENST00000422215 156 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 HSPE1P16-201ENST00000426640 348 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 HMGB3P11-201ENST00000440127 604 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 OR7E116P-201ENST00000448529 957 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC013470.1-201ENST00000453438 462 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 SNORD127-201ENST00000458892 86 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 RN7SL72P-201ENST00000460697 269 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 MIR4790-201ENST00000577799 79 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC008745.1-201ENST00000604064 271 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC012409.4-201ENST00000612923 249 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 227.1 ms