Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL592437.1-201ENST00000443781 492 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX3Q99909 AC010733.1-201ENST00000451515 401 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.92□□□□□ -1.78
SSX3Q99909 RNU7-140P-201ENST00000459546 60 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX3Q99909 AC091959.2-201ENST00000477363 321 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AC106872.2-201ENST00000494303 480 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AC104971.1-201ENST00000495117 578 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 RPS4XP18-201ENST00000495480 763 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX3Q99909 RNU6-202P-201ENST00000515998 96 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 RN7SKP276-201ENST00000516242 268 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSX3Q99909 OR6C73P-201ENST00000546432 358 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX3Q99909 EIF5A2P1-201ENST00000564027 460 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 MTND6P33-201ENST00000571794 183 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AC006270.2-201ENST00000578523 652 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX3Q99909 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.92□□□□□ -1.78
SSX3Q99909 AC110741.2-201ENST00000605278 268 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AL391358.1-201ENST00000605342 190 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AC007497.1-201ENST00000610421 561 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSX3Q99909 AC126544.2-201ENST00000625174 749 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AL121594.5-201ENST00000631724 573 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.92□□□□□ -1.78
SSX3Q99909 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.92□□□□□ -1.78
SSX3Q99909 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SSX3Q99909 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX3Q99909 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.92□□□□□ -1.78
SSX3Q99909 AC106871.1-201ENST00000568324 3102 ntBASIC3.92□□□□□ -1.78
SSX3Q99909 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.92□□□□□ -1.78
SSX3Q99909 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSX3Q99909 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX3Q99909 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SSX3Q99909 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSX3Q99909 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SSX3Q99909 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX3Q99909 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SSX3Q99909 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SSX3Q99909 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SSX3Q99909 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSX3Q99909 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX3Q99909 RNU6-1257P-201ENST00000384625 110 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 RNU6-1000P-201ENST00000391066 106 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSX3Q99909 AL357515.1-201ENST00000402967 542 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC092638.1-201ENST00000411966 1275 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX3Q99909 PTP4A1P7-201ENST00000423476 514 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX3Q99909 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 NRBF2P3-201ENST00000432731 865 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC092162.1-201ENST00000432828 434 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX3Q99909 ARF4P4-201ENST00000439608 520 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX3Q99909 Z77249.1-201ENST00000444622 1175 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.91□□□□□ -1.78
SSX3Q99909 RPL7P32-201ENST00000457119 744 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX3Q99909 RPS26P28-201ENST00000470806 348 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC078817.1-201ENST00000492623 435 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC108022.1-201ENST00000493466 478 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 RPL5P23-201ENST00000496040 868 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC008427.1-201ENST00000503102 655 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 KRT19P6-201ENST00000510983 209 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 Y_RNA.719-201ENST00000517156 106 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 SOD1P3-201ENST00000518682 454 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX3Q99909 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX3Q99909 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX3Q99909 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC133555.2-201ENST00000550213 292 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC079075.1-201ENST00000559543 878 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX3Q99909 SNORA74C-1-201ENST00000580726 201 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX3Q99909 VN1R87P-201ENST00000596706 487 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC104687.2-201ENST00000604442 342 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 AC010424.2-201ENST00000607594 443 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 MIR6748-201ENST00000610433 71 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 FAM27B-201ENST00000610601 213 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 RNU6-1192P-201ENST00000612197 107 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX3Q99909 RN7SL722P-201ENST00000617780 284 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 RN7SL565P-201ENST00000618246 284 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 RNU6-489P-201ENST00000618289 107 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX3Q99909 AL049536.1-201ENST00000625043 744 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX3Q99909 AL356118.1-201ENST00000635272 1078 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms