Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 MIR133B-201ENST00000362210 119 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 RNU1-74P-201ENST00000384108 171 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC009804.1-201ENST00000400949 179 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 HSPA8P15-201ENST00000401676 786 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 MIR1286-201ENST00000408112 78 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 RNU4-34P-201ENST00000410431 124 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 RNU6-272P-201ENST00000411028 104 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 TPMTP3-201ENST00000411928 735 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 PGBD4P8-201ENST00000412993 562 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC234782.4-201ENST00000417646 1048 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 CENPIP1-201ENST00000425713 902 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 SKP1P3-201ENST00000429280 487 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 MED14P1-201ENST00000430517 648 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC008072.1-201ENST00000434254 824 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AL627308.1-201ENST00000435693 821 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 MTND1P30-201ENST00000441241 901 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 RNU6-956P-201ENST00000458868 103 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 RPL7AP28-201ENST00000464513 571 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 RPL7P39-201ENST00000481157 744 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 NIFKP7-201ENST00000503365 834 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 OR5M14P-201ENST00000506803 618 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 MTATP6P22-201ENST00000507369 598 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 ATP1B1P1-201ENST00000509767 915 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC093281.2-201ENST00000510153 597 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 RN7SL708P-201ENST00000580952 299 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC008814.1-201ENST00000603797 406 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC107304.1-201ENST00000604229 296 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC018695.5-201ENST00000605872 315 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC092354.2-201ENST00000607786 514 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC000068.2-201ENST00000608816 460 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 MIR6837-201ENST00000620884 64 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 AL590240.3-201ENST00000621416 943 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AC127502.3-201ENST00000636170 1206 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 CASC19-264ENST00000641912 1184 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNX18Q96RF0 AL606537.1-201ENST00000607258 2011 ntBASIC4.72□□□□□ -1.65
SNX18Q96RF0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.72□□□□□ -1.65
SNX18Q96RF0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
SNX18Q96RF0 LINC01109-201ENST00000603837 3081 ntBASIC4.71□□□□□ -1.65
SNX18Q96RF0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SNX18Q96RF0 AC027228.2-201ENST00000567141 2154 ntBASIC4.71□□□□□ -1.65
SNX18Q96RF0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX18Q96RF0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX18Q96RF0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 RNU6-500P-201ENST00000362349 107 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 RNU6-582P-201ENST00000362989 107 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 RNA5SP234-201ENST00000363916 119 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 RPS15AP38-201ENST00000413110 372 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 E2F6P2-201ENST00000420708 748 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC009238.2-201ENST00000431026 355 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 RPS27AP15-201ENST00000447672 466 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 OR6C5P-201ENST00000452388 923 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX18Q96RF0 RPL37P3-201ENST00000456825 293 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 AC010307.1-201ENST00000467206 836 ntBASIC4.71□□□□□ -1.66
SNX18Q96RF0 COPS8P2-201ENST00000473228 627 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms