Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC073069.1-201ENST00000428657 441 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 RPL7P4-203ENST00000430239 730 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC006466.1-201ENST00000438721 289 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AL606662.1-201ENST00000445763 553 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 SBDSP1-204ENST00000453858 737 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 BZW1P2-201ENST00000473537 826 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC058823.1-201ENST00000485315 474 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC00888-204ENST00000487386 421 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 RN7SL244P-201ENST00000493405 297 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC005912.1-201ENST00000495392 255 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 NDUFA5P12-201ENST00000503796 343 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 WBP1LP4-201ENST00000505043 344 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 HMGB3P13-201ENST00000511263 607 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 OR5BM1P-201ENST00000512021 366 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC090819.1-201ENST00000523800 1111 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC079171.1-201ENST00000568788 914 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 MIR4999-201ENST00000585029 91 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 AL354976.1-201ENST00000613843 387 ntBASIC4.89□□□□□ -1.63
VPS50Q96JG6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS50Q96JG6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS50Q96JG6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC006210.2-201ENST00000367074 1545 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 ELL2P3-201ENST00000457883 1602 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 SNORD116-9-201ENST00000384000 95 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 RNU6-1200P-201ENST00000384162 107 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 SNORD116-3-201ENST00000384287 95 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 SNORD116-7-201ENST00000384404 95 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 SNORD116-5-201ENST00000384462 95 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AL021407.1-201ENST00000404531 386 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 RN7SKP182-201ENST00000410772 298 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 SEPT2P1-201ENST00000419651 180 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 CLUHP1-201ENST00000435012 1190 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 MTCYBP34-201ENST00000439552 670 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 MTCYBP3-201ENST00000445588 1137 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 RPL7P59-201ENST00000447700 943 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 RPL7P18-201ENST00000478965 734 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 VPS26AP1-201ENST00000483197 979 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 MTCYBP16-201ENST00000509187 1129 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC079395.1-201ENST00000510981 262 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC010587.2-201ENST00000511727 448 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC021146.3-201ENST00000511911 260 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC004980.4-201ENST00000513375 203 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 RNA5SP373-201ENST00000517271 95 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 SMARCE1P4-201ENST00000523647 241 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms