Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC004938.1-201ENST00000438468 308 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC093155.1-201ENST00000440164 826 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 MTCYBP11-201ENST00000447254 1109 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 OR1H1P-201ENST00000448731 937 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AL591363.1-201ENST00000450091 483 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 RPL23AP15-201ENST00000450202 459 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 RN7SL738P-201ENST00000470264 297 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 NIP7P2-201ENST00000485801 544 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 RN7SL558P-201ENST00000497468 299 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC011352.3-201ENST00000505162 593 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 CDH12P4-201ENST00000517835 295 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 CDH12P3-201ENST00000517935 295 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 CDH12P1-201ENST00000518435 295 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC087808.1-201ENST00000520501 361 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AL121932.1-201ENST00000605542 214 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC017037.3-201ENST00000625016 472 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 AC104118.1-201ENST00000607625 1589 ntBASIC5.72□□□□□ -1.49
CHMP4CQ96CF2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CHMP4CQ96CF2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHMP4CQ96CF2 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 PRELID3BP11-201ENST00000414230 479 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 RPS26P47-201ENST00000427219 348 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 FABP7P2-201ENST00000429946 379 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 RPL37P1-201ENST00000432310 284 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 CEACAMP9-201ENST00000442990 513 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC000111.2-201ENST00000448200 210 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 SLC25A18P1-201ENST00000449385 454 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC239809.1-201ENST00000450470 217 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 PPIAP21-201ENST00000464473 501 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 RPL12P20-201ENST00000475538 479 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 GAPDHP56-201ENST00000506031 988 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC008837.2-201ENST00000513076 418 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 NDUFB4P12-201ENST00000513465 390 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 RN7SKP276-201ENST00000516242 268 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 RNU6-709P-201ENST00000517257 104 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 BGLT3-201ENST00000564523 994 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 UBE2FP2-201ENST00000566646 462 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AGGF1P6-201ENST00000569213 976 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 MIR4270-201ENST00000581799 70 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 NF1P5-201ENST00000588287 448 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL390838.2-201ENST00000602394 274 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL139344.1-201ENST00000605228 195 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC100847.1-201ENST00000611316 481 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL161616.1-201ENST00000611867 286 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC121761.2-201ENST00000617300 689 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC022106.2-201ENST00000620114 757 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL445437.1-201ENST00000623157 3087 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AL133243.3-201ENST00000617415 3004 ntBASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHMP4CQ96CF2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CHMP4CQ96CF2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms