Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC009804.1-201ENST00000400949 179 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 MIR1182-201ENST00000408363 97 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 PIGPP2-201ENST00000411569 458 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.69□□□□□ -1.5
ERCC4Q92889 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.69□□□□□ -1.5
ERCC4Q92889 AC008072.1-201ENST00000434254 824 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 TXNP5-201ENST00000441043 315 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AL031584.1-201ENST00000447169 754 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC4Q92889 Z92846.1-201ENST00000456203 268 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 RNU7-27P-201ENST00000459281 62 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 MTND1P16-201ENST00000465177 898 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AL133445.1-201ENST00000467051 452 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC4Q92889 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC4Q92889 AC098799.3-201ENST00000506095 438 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AC109927.2-201ENST00000506416 303 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 BX510359.5-201ENST00000515651 304 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC4Q92889 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC4Q92889 AC024940.3-201ENST00000538551 316 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC4Q92889 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC4Q92889 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.69□□□□□ -1.5
ERCC4Q92889 AC073648.5-201ENST00000603502 305 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC4Q92889 AP004247.3-201ENST00000608682 624 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 AC087241.4-201ENST00000612441 480 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.69□□□□□ -1.5
ERCC4Q92889 AL031667.3-201ENST00000620124 655 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ERCC4Q92889 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.69□□□□□ -1.5
ERCC4Q92889 AC011493.1-201ENST00000596753 1632 ntBASIC5.69□□□□□ -1.5
ERCC4Q92889 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ERCC4Q92889 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC4Q92889 CASC19-204ENST00000641001 2055 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
ERCC4Q92889 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AL121657.1-201ENST00000327215 531 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 Y_RNA.3-201ENST00000362331 103 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 RN7SKP162-201ENST00000363605 345 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 MIR600-201ENST00000385007 98 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 DEFB108C-201ENST00000400154 252 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 RN7SKP142-201ENST00000411236 328 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 TPMTP3-201ENST00000411928 735 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 ELOCP17-201ENST00000414751 326 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AL358176.3-201ENST00000420757 454 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC4Q92889 OR2AH1P-201ENST00000425717 928 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 COX6CP13-201ENST00000428703 226 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 MED14P1-201ENST00000430517 648 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC4Q92889 TRIM60P18-201ENST00000441518 828 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 NPM1P49-201ENST00000448027 714 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC022431.1-201ENST00000450941 438 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 RNU6-956P-201ENST00000458868 103 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC009127.1-201ENST00000467090 155 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC010460.1-201ENST00000507087 466 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 HMGB3P16-201ENST00000508037 287 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC109458.1-201ENST00000508858 316 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 HMGB1P23-201ENST00000518743 568 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 SMARCE1P4-201ENST00000523647 241 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC105233.3-201ENST00000531125 744 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.68□□□□□ -1.5
ERCC4Q92889 OR7K1P-201ENST00000546439 926 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC4Q92889 OR11J2P-201ENST00000555298 907 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC4Q92889 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.68□□□□□ -1.5
ERCC4Q92889 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC079089.3-201ENST00000603094 673 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 TAS2R6P-201ENST00000605022 826 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC092354.1-201ENST00000606057 376 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC005962.2-201ENST00000611427 652 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC022106.2-201ENST00000620114 757 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC135068.12-201ENST00000637370 931 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AC099063.3-201ENST00000642066 185 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 Z99496.1-201ENST00000469424 1477 ntBASIC5.68□□□□□ -1.5
ERCC4Q92889 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ERCC4Q92889 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ERCC4Q92889 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.68□□□□□ -1.5
ERCC4Q92889 AL353743.4-201ENST00000422653 1547 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms