Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC123786.2-201ENST00000603459 275 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 AC009948.4-201ENST00000604692 675 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 BNIP3P4-201ENST00000604946 565 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 AC093424.1-201ENST00000604999 338 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 AL138478.1-201ENST00000612252 832 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 AL121873.1-201ENST00000616013 524 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 AC015908.5-201ENST00000623289 343 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 OR1S1-201ENST00000624470 978 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 ASNSP1-201ENST00000518311 1939 ntBASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A1Q8WWI5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC111188.2-201ENST00000529697 1387 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 RNU1-87P-201ENST00000363727 170 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 RNU6-224P-201ENST00000384055 107 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 CYB5AP4-201ENST00000396692 399 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 HIGD1AP15-201ENST00000416198 280 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC092447.3-201ENST00000426027 686 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 CBX1P4-201ENST00000439415 457 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 HMGB3P6-201ENST00000444896 598 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AL139824.2-201ENST00000458731 1095 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 CCDC75P1-201ENST00000469247 791 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC114322.1-201ENST00000506771 926 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 PRELID3BP5-201ENST00000508612 460 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 OR5M7P-201ENST00000526140 972 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 CLIC4P2-201ENST00000601934 717 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 MIR6820-201ENST00000611508 62 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC026368.1-201ENST00000614934 690 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC139769.3-201ENST00000618383 175 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 VN1R7P-201ENST00000619242 903 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC006065.6-201ENST00000625201 545 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC010928.1-201ENST00000592477 1447 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AC074029.4-201ENST00000624796 1859 ntBASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC44A1Q8WWI5 MAPK10-263ENST00000641052 4307 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 AC090971.4-201ENST00000560291 1800 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 RNA5SP87-201ENST00000384155 118 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 SNORA11C-201ENST00000408532 129 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 RNU4-22P-201ENST00000411058 166 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 TRGV6-201ENST00000417928 299 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 Z73417.1-201ENST00000447373 778 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 AC005002.1-201ENST00000447458 540 ntBASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC44A1Q8WWI5 DNAJC19P8-201ENST00000452887 259 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms