Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC090425.2-201ENST00000608818 501 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC114781.5-201ENST00000615297 108 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AL121895.2-201ENST00000619558 447 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC073869.7-201ENST00000640874 297 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AL356317.1-201ENST00000396110 1436 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 VPS35P1-201ENST00000563400 1518 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 CDY11P-201ENST00000447168 1651 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 SNORD113-6-201ENST00000363345 75 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RNU4-92P-201ENST00000363783 136 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RNA5SP366-201ENST00000365454 123 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 SNORA56-201ENST00000383966 129 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 HMGB1P10-201ENST00000395823 563 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL078595.1-201ENST00000404458 226 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 MTND4P3-201ENST00000417829 541 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL096803.2-201ENST00000450032 677 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL133217.1-201ENST00000450980 425 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC009963.2-201ENST00000453431 138 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RPS6P2-201ENST00000454208 705 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RN7SL585P-201ENST00000470538 280 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RPS29P19-201ENST00000479709 171 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RPS3AP22-201ENST00000488297 769 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC025554.1-201ENST00000505641 188 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC034244.1-201ENST00000507687 207 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC118282.2-201ENST00000508739 374 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 SNORA3.4-201ENST00000515969 96 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC090819.1-201ENST00000523800 1111 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC063950.1-201ENST00000552036 308 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RN7SL622P-201ENST00000585292 275 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 MIR6820-201ENST00000611508 62 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC013562.2-201ENST00000611632 603 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC026585.1-201ENST00000619582 524 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AP000843.1-201ENST00000624880 701 ntBASIC4.52□□□□□ -1.69
LMO3Q8TAP4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.52□□□□□ -1.69
LMO3Q8TAP4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 BMS1P3-201ENST00000372011 932 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SNORD116-9-201ENST00000384000 95 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SNORD116-3-201ENST00000384287 95 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SNORD116-7-201ENST00000384404 95 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SNORD116-5-201ENST00000384462 95 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 MIR513A2-201ENST00000385249 127 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms