Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL031985.3-201ENST00000565390 2449 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RN7SKP185-201ENST00000362813 326 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RN7SKP6-201ENST00000364795 319 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RN7SKP69-201ENST00000365390 305 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RNU4-2-201ENST00000365668 141 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 OR52E6-202ENST00000379946 954 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RNU6-723P-201ENST00000383973 107 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL136133.1-201ENST00000413694 376 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RPL7P56-201ENST00000429441 717 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 B3GNT2P1-201ENST00000434960 952 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL831737.1-201ENST00000441288 271 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC019185.1-201ENST00000442718 389 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 SNRPEP8-201ENST00000442866 260 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 NPM1P39-201ENST00000449818 867 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC096741.1-201ENST00000472250 846 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RN7SL174P-201ENST00000475578 289 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL161747.1-201ENST00000480068 358 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RPL7AP10-201ENST00000481016 791 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC106872.4-201ENST00000510050 523 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 IMPA1P1-201ENST00000510718 842 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 OR4R3P-201ENST00000525084 838 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL359219.2-201ENST00000555184 348 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 FO393422.1-201ENST00000603908 708 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AP000860.1-201ENST00000605250 559 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 RNU6-88P-201ENST00000606801 100 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL354760.1-201ENST00000608357 643 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC027807.2-201ENST00000616099 408 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL121890.2-201ENST00000617644 465 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 ASNSP1-204ENST00000641977 1664 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AL606537.1-201ENST00000607258 2011 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 VPS35P1-201ENST00000563400 1518 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 RNU4-12P-201ENST00000365233 139 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 RNU6-114P-201ENST00000384704 105 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 MIR551A-201ENST00000385042 96 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AL450338.1-201ENST00000407987 512 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 RN7SKP206-201ENST00000410823 293 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 HMGB3P23-201ENST00000414981 585 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AIMP1P1-201ENST00000418670 937 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AL109913.1-201ENST00000421173 514 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 VDAC1P6-201ENST00000430062 855 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AC099670.2-201ENST00000435130 321 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.81□□□□□ -1.64
CPEB3Q8NE35 UBE2V1P7-201ENST00000446395 340 ntBASIC4.81□□□□□ -1.64
CPEB3Q8NE35 AC073909.1-201ENST00000447112 999 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms