Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 YWHAQP9-201ENST00000445891 512 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 MOB1AP2-201ENST00000446060 614 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 RPL7P55-201ENST00000450522 746 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 HMGB3P22-202ENST00000451823 572 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC091685.2-201ENST00000454924 864 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 RPL37P3-201ENST00000456825 293 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 RPL30P11-201ENST00000495304 339 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 OR5H3P-201ENST00000502817 919 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC112518.2-201ENST00000508565 425 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC109458.1-201ENST00000508858 316 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 OR5H4P-201ENST00000510851 923 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 MTCO1P30-201ENST00000515244 580 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 RNU2-58P-201ENST00000516403 183 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 RNA5SP34-201ENST00000516887 130 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AL360157.1-201ENST00000565962 87 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC020914.4-201ENST00000597690 277 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 MTATP6P2-201ENST00000603319 678 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC104662.1-201ENST00000604448 511 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC005084.1-201ENST00000605160 304 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC026741.1-201ENST00000605892 482 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AP000894.4-201ENST00000610185 483 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 MTCO1P18-201ENST00000455518 1419 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AL136520.1-201ENST00000600311 1322 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC027287.1-201ENST00000553115 1453 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 SNORA51.8-201ENST00000384234 132 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 HMGB3P31-201ENST00000413333 595 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 RPL31P45-201ENST00000419532 356 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 RPL23AP81-201ENST00000455252 467 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 CFTRP1-201ENST00000456646 183 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 CYCSP20-201ENST00000473154 315 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 RPS29P19-201ENST00000479709 171 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 MTND3P3-201ENST00000505004 126 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 IGKV2-23-201ENST00000518729 323 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 IGKV1-32-201ENST00000519290 311 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 IGLV2-28-201ENST00000520681 304 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AP001781.1-201ENST00000530977 207 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC104229.1-201ENST00000561364 255 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AP000919.1-202ENST00000581139 1264 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC069061.3-201ENST00000582254 823 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC245100.7-201ENST00000609678 442 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 BX323046.1-201ENST00000610145 535 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC022467.1-201ENST00000614738 749 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC087385.3-201ENST00000620477 187 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 AC010928.1-201ENST00000592477 1447 ntBASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC71LQ8N9Z2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC71LQ8N9Z2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms