Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 XIAPP1-201ENST00000603162 600 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC091193.1-201ENST00000604640 448 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC245389.1-201ENST00000605141 529 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC093388.1-201ENST00000609166 430 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AL031777.2-201ENST00000611953 196 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC069234.4-201ENST00000621276 412 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC015908.5-201ENST00000623289 343 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC007012.2-201ENST00000623206 1676 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC009229.4-201ENST00000623854 1947 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC027575.3-201ENST00000583058 2747 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RNA5SP65-201ENST00000363166 119 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 Y_RNA.187-201ENST00000363918 113 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 Y_RNA.197-201ENST00000364004 102 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RN7SKP158-201ENST00000410453 326 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RN7SKP254-201ENST00000410685 310 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RNU2-15P-201ENST00000410692 191 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RPL7L1P10-201ENST00000427790 463 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RPL12P17-201ENST00000432393 498 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AC016696.1-201ENST00000446949 318 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 Y_RNA.654-201ENST00000497848 106 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 COX7A2P2-201ENST00000505291 250 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AC021220.1-201ENST00000507445 630 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AC022634.1-201ENST00000520765 532 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 MTND4P7-201ENST00000523876 130 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AP000859.1-201ENST00000525536 307 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 DEFB109D-201ENST00000529497 240 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AP000889.2-201ENST00000532684 490 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 OR5B10P-201ENST00000532869 642 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AC124068.1-201ENST00000563131 678 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 ACTG1P15-201ENST00000570019 1063 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RN7SL199P-201ENST00000578752 281 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RN7SL131P-201ENST00000579043 256 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RN7SL656P-201ENST00000579044 281 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RN7SL404P-201ENST00000582421 281 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RPSAP66-201ENST00000592196 606 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AP001554.1-201ENST00000604533 376 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 uc_338.34-201ENST00000617467 174 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AC078909.2-201ENST00000620584 398 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 SNX18P10-201ENST00000625014 519 ntBASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.34□□□□□ -1.39
DEPDC4Q8N2C3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.34□□□□□ -1.4
DEPDC4Q8N2C3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
DEPDC4Q8N2C3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
DEPDC4Q8N2C3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.34□□□□□ -1.4
DEPDC4Q8N2C3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
DEPDC4Q8N2C3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
DEPDC4Q8N2C3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
DEPDC4Q8N2C3 TNPO1P2-201ENST00000426249 2665 ntBASIC6.33□□□□□ -1.4
DEPDC4Q8N2C3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.33□□□□□ -1.4
DEPDC4Q8N2C3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
DEPDC4Q8N2C3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
DEPDC4Q8N2C3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
DEPDC4Q8N2C3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms