Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 UQCRHP4-201ENST00000471686 272 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 CR383656.1-201ENST00000484916 377 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 XKRY-201ENST00000510392 1100 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 RNA5SP315-201ENST00000516340 116 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 RNA5SP312-201ENST00000517068 116 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 AGGF1P4-201ENST00000568249 801 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 MIR4801-201ENST00000582704 82 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC012254.4-201ENST00000588843 273 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC068020.1-201ENST00000594215 661 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC130352.1-201ENST00000602979 661 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AL591034.3-201ENST00000605511 685 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AP002360.4-201ENST00000606980 481 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AL354976.1-201ENST00000613843 387 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 MIR6891-201ENST00000618788 93 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 Z69908.1-201ENST00000622603 247 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AL157770.1-201ENST00000623049 439 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC011815.3-201ENST00000624194 473 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC007490.1-201ENST00000624321 703 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 MIR3653-201ENST00000625572 110 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 LINC01808-202ENST00000641680 1116 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC139713.2-210ENST00000641741 992 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE4Q8N205 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE4Q8N205 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SYNE4Q8N205 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE4Q8N205 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.65□□□□□ -1.51
SYNE4Q8N205 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE4Q8N205 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
SYNE4Q8N205 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SYNE4Q8N205 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SYNE4Q8N205 AL390237.1-201ENST00000404226 1415 ntBASIC5.65□□□□□ -1.51
SYNE4Q8N205 AC005832.2-201ENST00000538921 1430 ntBASIC5.65□□□□□ -1.51
SYNE4Q8N205 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.65□□□□□ -1.51
SYNE4Q8N205 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE4Q8N205 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE4Q8N205 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE4Q8N205 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE4Q8N205 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 MIR331-201ENST00000362302 94 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 RNA5SP387-201ENST00000364226 106 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 RN7SKP186-201ENST00000365371 303 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 RNA5SP366-201ENST00000365454 123 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL034403.1-201ENST00000399414 885 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL583835.1-201ENST00000399570 407 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 FCF1P5-201ENST00000406490 482 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL593851.1-201ENST00000426171 157 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 MOB1AP1-201ENST00000430903 535 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC011998.1-201ENST00000433403 117 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 TPTE2P6-202ENST00000445572 1007 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 MTND4P18-201ENST00000447010 465 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 DHFRP3-201ENST00000455595 559 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 RPS7P7-201ENST00000463499 571 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC053481.1-201ENST00000467217 306 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC104689.1-201ENST00000473356 768 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 BTG4P1-201ENST00000510421 183 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 RNA5SP249-201ENST00000516127 99 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 RNU5A-4P-201ENST00000516588 111 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 MIR3158-1-201ENST00000583596 81 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 SUMO2P14-201ENST00000604488 293 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC241377.1-201ENST00000619797 406 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 AC010608.2-201ENST00000624830 470 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNE4Q8N205 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE4Q8N205 CPHL1P-201ENST00000461341 3407 ntBASIC5.64□□□□□ -1.51
SYNE4Q8N205 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNE4Q8N205 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SYNE4Q8N205 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE4Q8N205 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE4Q8N205 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms