Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC015726.3-201ENST00000624501 418 ntBASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 RNA5SP196-201ENST00000625967 102 ntBASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 AC083865.1-201ENST00000636634 831 ntBASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 MTCO1P4-201ENST00000520516 1409 ntBASIC3.78□□□□□ -1.8
C9orf40Q8IXQ3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC096656.1-201ENST00000623826 1364 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC008432.1-201ENST00000615912 1320 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 METTL21EP-201ENST00000298105 713 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 SNORD35B-201ENST00000363660 87 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC093719.1-202ENST00000392735 373 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 FABP12P1-201ENST00000401911 322 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 ATF1P1-201ENST00000406040 927 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 TRGV6-201ENST00000417928 299 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AL391219.1-201ENST00000422570 483 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 OR5BE1P-201ENST00000425977 939 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 MED6P1-201ENST00000439659 713 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 RPL5P32-201ENST00000454085 879 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 RNU6-334P-201ENST00000517072 102 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 MTND1P6-201ENST00000523621 946 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AP002812.4-201ENST00000532139 286 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC107016.1-201ENST00000550463 337 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC079171.1-201ENST00000568788 914 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC025627.2-201ENST00000576220 160 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC012417.1-201ENST00000582307 1039 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 PSMA6P4-201ENST00000603247 718 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC067959.1-201ENST00000604334 379 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC010857.1-201ENST00000606398 594 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC103858.2-201ENST00000621471 543 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 OR5BE1P-202ENST00000641168 1176 ntBASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf40Q8IXQ3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 MARK2P15-201ENST00000432204 2186 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 RN7SKP227-201ENST00000364445 330 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 RNU6-317P-201ENST00000384031 107 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 MIR92A2-201ENST00000385299 75 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC013404.1-201ENST00000413068 249 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 VTA1P1-201ENST00000414044 866 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 SEC63P1-201ENST00000425785 1258 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 CYCSP20-201ENST00000473154 315 ntBASIC3.76□□□□□ -1.81
C9orf40Q8IXQ3 AC015908.1-201ENST00000478739 476 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms