Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC010608.2-201ENST00000624830 470 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC50Q8IVM0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 DDX6P1-205ENST00000441966 1436 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC100871.1-201ENST00000507871 1456 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 RNA5SP239-201ENST00000410218 129 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC017083.1-201ENST00000428093 483 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC023512.1-201ENST00000444513 499 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 HMGB1P5-202ENST00000451497 985 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 ANP32BP2-201ENST00000454525 545 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 DNAJC19P1-201ENST00000455312 319 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC107398.1-201ENST00000486904 505 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 SUMO1P1-201ENST00000497904 306 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 SNORA31.9-201ENST00000516429 84 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 RAB9BP1-201ENST00000519581 626 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 HMGB1P46-201ENST00000520062 610 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 CYCSP29-201ENST00000533731 318 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC006116.5-201ENST00000591936 559 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC104785.1-201ENST00000603220 588 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 RNVU1-4-201ENST00000612985 164 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AL139089.1-201ENST00000620372 975 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC007529.1-201ENST00000418574 2178 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AC053481.2-202ENST00000582394 1500 ntBASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC50Q8IVM0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 RNA5SP399-201ENST00000364003 117 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL589655.1-201ENST00000405398 482 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 RN7SKP33-201ENST00000410942 340 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 TPT1P2-201ENST00000413105 503 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 RPL18P10-201ENST00000425606 538 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 TRIM60P13-201ENST00000432350 1283 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC092809.1-201ENST00000441469 474 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 RANP8-201ENST00000444720 713 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 TPT1P13-201ENST00000449760 499 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 RPL7P31-201ENST00000450192 724 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC004801.2-202ENST00000463559 283 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL132838.2-201ENST00000492041 314 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 RNU6-1004P-201ENST00000516584 111 ntBASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC50Q8IVM0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms