Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 USP12PX-201ENST00000432383 1057 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC234064.1-201ENST00000436312 247 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AL138787.1-202ENST00000437804 898 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 VN1R10P-201ENST00000447106 875 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 HMGB1P16-201ENST00000447155 540 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 TPT1P14-201ENST00000448018 505 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 MTCO3P11-201ENST00000455103 774 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC245028.2-201ENST00000458673 253 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC097484.1-201ENST00000471148 389 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 FAM92A1P2-202ENST00000504766 877 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 IGHV3-32-201ENST00000519182 355 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC104383.1-201ENST00000530297 370 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 HAUS8P1-201ENST00000549005 542 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC009101.1-201ENST00000568135 242 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC006116.3-201ENST00000592968 361 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AL158211.4-201ENST00000606988 584 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AL627230.1-201ENST00000613077 211 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 AL591926.8-201ENST00000616876 211 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 CASC19-221ENST00000641309 1382 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.98□□□□□ -1.61
VRK3Q8IV63 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 AC092376.2-201ENST00000622621 4116 ntBASIC4.98□□□□□ -1.61
VRK3Q8IV63 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VRK3Q8IV63 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 TEX21P-201ENST00000447107 1476 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 Y_RNA.18-201ENST00000362461 102 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 SNORA72.1-201ENST00000363485 129 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 MTATP6P27-201ENST00000416987 621 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 Z97055.1-201ENST00000419730 712 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 MRPS36P1-201ENST00000421291 307 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 GLRXP1-201ENST00000423261 334 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 MTCO1P54-201ENST00000430139 712 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 HMGB1P31-201ENST00000437242 427 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 GAPDHP39-201ENST00000481866 979 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AL049874.2-201ENST00000492636 288 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 OR5H5P-201ENST00000503164 928 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC010350.1-201ENST00000504908 231 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 ATP1B1P1-201ENST00000509767 915 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 OR5BC1P-201ENST00000529327 739 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 DEFB108A-201ENST00000530110 222 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC022832.1-201ENST00000530718 645 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 OR4C2P-201ENST00000530855 1064 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AL359219.2-201ENST00000555184 348 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 ANP32BP3-201ENST00000559213 706 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 EIF5A2P1-201ENST00000564027 460 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC011447.4-201ENST00000587562 111 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC105254.2-201ENST00000603636 436 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC011453.2-201ENST00000603737 729 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 413.5 ms