Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 RFPL1S-203ENST00000539579 330 ntBASIC3.8□□□□□ -1.8
RAB43Q86YS6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAB43Q86YS6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 HSPE1P5-201ENST00000561489 272 ntBASIC3.8□□□□□ -1.8
RAB43Q86YS6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 MIR3158-1-201ENST00000583596 81 ntBASIC3.8□□□□□ -1.8
RAB43Q86YS6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 BNIP3P22-201ENST00000593399 556 ntBASIC3.8□□□□□ -1.8
RAB43Q86YS6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.8□□□□□ -1.8
RAB43Q86YS6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAB43Q86YS6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAB43Q86YS6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAB43Q86YS6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 RPS4XP5-202ENST00000449995 1334 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 RN7SKP44-201ENST00000363602 316 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 ATP5F1P3-201ENST00000397213 657 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AL590704.1-201ENST00000402856 794 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 MIR1183-201ENST00000408856 89 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 EXTL2P1-201ENST00000446218 416 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 VN1R34P-201ENST00000447387 883 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 FABP3P2-201ENST00000453169 399 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC091153.1-201ENST00000466297 402 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC007688.1-201ENST00000475592 759 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC092045.1-201ENST00000495716 1231 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 RNU6-347P-201ENST00000516658 105 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 SNORA67.7-201ENST00000516664 135 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC091516.1-201ENST00000549191 703 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC009101.1-201ENST00000568135 242 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC107982.3-201ENST00000584957 985 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC128687.2-201ENST00000609657 566 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 MIR6868-201ENST00000611215 58 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC090246.1-201ENST00000616499 426 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AL354798.1-201ENST00000622505 329 ntBASIC3.79□□□□□ -1.8
RAB43Q86YS6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.79□□□□□ -1.8
RAB43Q86YS6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAB43Q86YS6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 RNU6-618P-201ENST00000363518 112 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 MIR200C-201ENST00000384980 68 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 Z85994.2-201ENST00000434327 452 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 RPS20P1-201ENST00000434853 354 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 RPS26P40-201ENST00000435209 294 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 RPL12P46-201ENST00000436610 195 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC092013.1-201ENST00000438795 332 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 ARL5AP3-201ENST00000439327 386 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 RPL21P71-201ENST00000465598 459 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC104629.2-201ENST00000468627 598 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC010627.1-201ENST00000503819 1294 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 ATG10-AS1-201ENST00000504846 648 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC005798.1-201ENST00000513715 387 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC135001.1-201ENST00000544546 283 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC007424.1-203ENST00000554613 687 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms