Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CYCSP52-201ENST00000422857 310 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 FABP7P2-201ENST00000429946 379 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 RPL34P6-201ENST00000432390 345 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 H3F3BP1-201ENST00000440551 403 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 RPS20P32-201ENST00000456044 356 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 H3F3AP3-201ENST00000497682 407 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 SUMO2P4-201ENST00000504193 276 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC018645.1-201ENST00000505003 109 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC021146.1-201ENST00000511202 716 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 RPL39P5-202ENST00000512505 151 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AL022099.1-201ENST00000604551 712 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC097467.4-201ENST00000605504 141 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 MIR7109-201ENST00000613748 65 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 uc_338.11-201ENST00000619132 160 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC078938.1-201ENST00000620993 318 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AP002370.1-201ENST00000528055 1602 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 SAGE3P-201ENST00000619800 1635 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 RPL32P3-201ENST00000359025 275 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 RNU6-1115P-201ENST00000362490 106 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 U3.12-201ENST00000364498 214 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 SNORA64.3-201ENST00000365647 134 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 DHFRP6-201ENST00000401776 268 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 RPL7P10-201ENST00000417407 739 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AL451136.1-201ENST00000435399 325 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 RPL23AP19-201ENST00000436229 369 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AL138799.3-201ENST00000438968 350 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 PRPS1P1-201ENST00000445305 876 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 TRBV1-201ENST00000476502 284 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC092824.1-201ENST00000483524 576 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 HSPD1P15-201ENST00000505573 1122 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 Y_RNA.668-201ENST00000516233 93 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC116917.1-201ENST00000520558 305 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AL133399.1-201ENST00000527476 298 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 PMS2P3-207ENST00000529061 717 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC008126.1-201ENST00000549019 480 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 UBE2L4-201ENST00000587688 464 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AL589743.6-201ENST00000611025 117 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 MIR6085-201ENST00000618314 110 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 MIR6823-201ENST00000622118 61 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC138627.2-201ENST00000624202 601 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 AC007159.1-201ENST00000566529 4706 ntBASIC6.49□□□□□ -1.37
LYSMD3Q7Z3D4 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms