Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 VN1R79P-201ENST00000593540 513 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AL022067.1-201ENST00000602426 454 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC091057.3-201ENST00000602684 733 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 U3.53-201ENST00000628922 216 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AL121594.5-201ENST00000631724 573 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC010928.1-201ENST00000592477 1447 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 MTND5P28-201ENST00000438005 1594 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 RNU6-353P-201ENST00000364266 108 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 MIR585-201ENST00000384887 94 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 RPS16P5-201ENST00000406501 404 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 SNORA11B-201ENST00000408175 129 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 RPL37P18-201ENST00000411602 243 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 TAF13P2-201ENST00000416876 286 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 OR51AB1P-201ENST00000429046 620 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 RPS26P56-201ENST00000444468 240 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 Z77249.1-201ENST00000444622 1175 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC073264.2-201ENST00000448886 166 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 RPL23AP15-201ENST00000450202 459 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC108463.1-201ENST00000450258 347 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 TVP23BP2-201ENST00000455082 615 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 RPS29P22-201ENST00000472363 168 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC104763.1-201ENST00000475274 360 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC007686.1-201ENST00000488511 463 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 RPL36AP41-201ENST00000493820 306 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 OR8I1P-201ENST00000529291 931 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AP006289.1-201ENST00000538089 277 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC104785.1-201ENST00000603220 588 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AL139286.1-201ENST00000604465 483 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC009948.4-201ENST00000604692 675 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AL121652.1-201ENST00000608851 448 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC138649.5-201ENST00000637456 137 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 BX649567.1-201ENST00000642071 1134 ntBASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP54Q7Z3B4 AC108467.2-201ENST00000617640 1597 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 RNA5SP397-201ENST00000391323 118 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 SDHCP2-201ENST00000398565 501 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC069218.2-201ENST00000411665 344 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 CYCSP10-201ENST00000417973 294 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 HSFY1P1-201ENST00000423928 1178 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 CKS1BP5-201ENST00000434172 273 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 ARL4AP3-201ENST00000441452 574 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AL162591.2-201ENST00000449634 317 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 RPL5P32-201ENST00000454085 879 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 IGLV2-34-201ENST00000490007 283 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC108022.1-201ENST00000493466 478 ntBASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP54Q7Z3B4 AC020593.1-201ENST00000507399 299 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms