Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MAPK10-253ENST00000641010 4072 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTR9Q6PD62 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AL445437.1-201ENST00000623157 3087 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AL512283.1-201ENST00000606756 1384 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTR9Q6PD62 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 SNORA60-201ENST00000362396 134 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AL353692.2-201ENST00000407054 335 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 OR5BE1P-201ENST00000425977 939 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 MORF4L1P7-201ENST00000426038 703 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC073508.1-201ENST00000428866 656 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AL353898.1-201ENST00000444055 238 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 RPS11P1-201ENST00000451072 473 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 CALM1P2-201ENST00000452941 448 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 RPL5P13-201ENST00000462840 709 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 UBTFL9-201ENST00000534504 1148 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 NOP56P3-201ENST00000549457 385 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC025627.2-201ENST00000576220 160 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 RN7SL703P-201ENST00000578485 302 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC012417.1-201ENST00000582307 1039 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC007423.1-201ENST00000605009 627 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AL109618.2-201ENST00000605527 211 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC004775.1-201ENST00000607389 753 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC000123.2-201ENST00000623124 461 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AP005264.7-201ENST00000625003 745 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 OR5BE1P-202ENST00000641168 1176 ntBASIC4.82□□□□□ -1.64
CTR9Q6PD62 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTR9Q6PD62 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTR9Q6PD62 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.82□□□□□ -1.64
CTR9Q6PD62 Z82217.1-201ENST00000625157 8149 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTR9Q6PD62 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTR9Q6PD62 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 RN7SKP56-201ENST00000410513 331 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 PGBD4P8-201ENST00000412993 562 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC022022.1-201ENST00000430304 178 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AP000949.1-201ENST00000438328 629 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC007000.2-201ENST00000442564 487 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC092691.2-201ENST00000461787 803 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AP000926.1-201ENST00000479573 241 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC093663.2-201ENST00000484625 313 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 RPL29P14-201ENST00000495837 428 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AL136520.1-202ENST00000555494 763 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC053481.4-201ENST00000583164 216 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC022916.3-201ENST00000592961 742 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 VN1R79P-201ENST00000593540 513 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC099676.1-201ENST00000608886 657 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AL031666.3-201ENST00000609320 1006 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC116447.1-201ENST00000613153 453 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC010329.2-201ENST00000595195 2737 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTR9Q6PD62 AC022893.2-201ENST00000564832 3296 ntBASIC4.81□□□□□ -1.64
CTR9Q6PD62 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTR9Q6PD62 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms