Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX30Q5VWJ9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX30Q5VWJ9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SNX30Q5VWJ9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX30Q5VWJ9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX30Q5VWJ9 AL133243.3-201ENST00000617415 3004 ntBASIC4.77□□□□□ -1.65
SNX30Q5VWJ9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX30Q5VWJ9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL391684.1-202ENST00000641293 1636 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 RNA5SP391-201ENST00000363456 119 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 Y_RNA.578-201ENST00000390903 88 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL080315.1-201ENST00000406055 466 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL160275.2-201ENST00000412010 394 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 BTF3P8-201ENST00000414577 526 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 MTND4P3-201ENST00000417829 541 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL592293.2-201ENST00000422292 996 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 PDSS1P1-201ENST00000422953 1114 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 TDGF1P1-201ENST00000445734 527 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 RPS27AP15-201ENST00000447672 466 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC079203.1-201ENST00000487972 404 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 HMGB1P21-201ENST00000502313 581 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 snoZ278.1-201ENST00000517059 112 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC015912.2-201ENST00000571053 181 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC023762.1-201ENST00000603280 584 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC011458.1-201ENST00000604034 617 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC112220.2-201ENST00000605513 533 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AL359757.1-201ENST00000623176 255 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 MAPK10-303ENST00000641324 3959 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC018529.3-201ENST00000624212 2254 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 CPHL1P-201ENST00000461341 3407 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 AC111188.2-201ENST00000529697 1387 ntBASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SNX30Q5VWJ9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 SNORA62-201ENST00000365493 153 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 MCTS2P-201ENST00000394552 546 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 RAB28P1-201ENST00000411517 641 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 RPS7P9-201ENST00000414704 586 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 RAD23BP1-201ENST00000421404 1227 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 RPL7AP25-201ENST00000423357 805 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 RPL23AP93-201ENST00000440847 484 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 RPL7P31-201ENST00000450192 724 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC013356.1-201ENST00000489027 564 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 PRELID3BP6-201ENST00000503839 571 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC110792.2-201ENST00000510278 224 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 HMGB3P13-201ENST00000511263 607 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC021451.1-201ENST00000523498 1129 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 MIR4277-201ENST00000578298 84 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC069431.2-201ENST00000604149 1099 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 VN1R7P-201ENST00000619242 903 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 AC084824.4-201ENST00000620106 731 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 EOGT-210ENST00000615922 1931 ntBASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX30Q5VWJ9 LINC00622-201ENST00000562811 1570 ntBASIC4.74□□□□□ -1.65
SNX30Q5VWJ9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms