Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGN3Q15651 NDUFB9P3-201ENST00000521269 501 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 HIGD1AP10-201ENST00000527837 282 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGN3Q15651 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGN3Q15651 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGN3Q15651 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
HMGN3Q15651 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGN3Q15651 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HMGN3Q15651 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGN3Q15651 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGN3Q15651 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGN3Q15651 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGN3Q15651 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HMGN3Q15651 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGN3Q15651 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGN3Q15651 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGN3Q15651 RPS7P13-201ENST00000413955 498 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGN3Q15651 TCEA1P2-201ENST00000420496 906 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 OR8F1P-201ENST00000425243 930 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGN3Q15651 NDUFB1P1-201ENST00000435191 180 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 MTCYBP31-201ENST00000438855 1122 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGN3Q15651 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGN3Q15651 OR9M1P-201ENST00000459641 921 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGN3Q15651 NPM1P17-201ENST00000479221 602 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.09□□□□□ -1.91
HMGN3Q15651 AC108064.1-201ENST00000513791 460 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGN3Q15651 SCARNA14-201ENST00000516903 136 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGN3Q15651 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 AC037471.2-201ENST00000564941 598 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 AC115621.1-201ENST00000604653 858 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 AC006338.2-201ENST00000616864 791 ntBASIC3.09□□□□□ -1.91
HMGN3Q15651 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HMGN3Q15651 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGN3Q15651 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HMGN3Q15651 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.09□□□□□ -1.92
HMGN3Q15651 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.09□□□□□ -1.92
HMGN3Q15651 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HMGN3Q15651 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HMGN3Q15651 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HMGN3Q15651 SPRR2C-201ENST00000290702 219 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.08□□□□□ -1.92
HMGN3Q15651 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
HMGN3Q15651 SNORA56-201ENST00000383966 129 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HMGN3Q15651 SOD2P1-201ENST00000396543 562 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AL117339.2-201ENST00000430475 180 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGN3Q15651 RPL21P89-201ENST00000444021 467 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 RPS3AP50-201ENST00000487064 803 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 RNU6-352P-201ENST00000516908 107 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGN3Q15651 OR7E13P-201ENST00000526052 910 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 AL121766.1-201ENST00000547436 487 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AC004024.1-201ENST00000549244 247 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HMGN3Q15651 AL845331.3-202ENST00000562856 261 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGN3Q15651 MIR4700-201ENST00000578311 74 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGN3Q15651 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGN3Q15651 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGN3Q15651 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGN3Q15651 AC005255.1-201ENST00000593748 216 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 AL606490.9-201ENST00000603331 271 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AL139041.1-201ENST00000605480 610 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 AC012531.5-201ENST00000611375 151 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AC016957.2-201ENST00000616998 848 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 CDRT1-208ENST00000630868 794 ntBASIC3.08□□□□□ -1.92
HMGN3Q15651 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGN3Q15651 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGN3Q15651 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGN3Q15651 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGN3Q15651 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HMGN3Q15651 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
HMGN3Q15651 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGN3Q15651 MIR372-201ENST00000362225 67 ntBASIC3.07□□□□□ -1.92
HMGN3Q15651 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms