Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 OR8G2P-201ENST00000412796 908 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX1Q15475 RPL21P109-201ENST00000422213 475 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIX1Q15475 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX1Q15475 RPS27P5-201ENST00000444247 244 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AL096829.2-201ENST00000446582 742 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AL121877.1-201ENST00000453704 622 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 FTH1P2-201ENST00000466086 412 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 CYCSP20-201ENST00000473154 315 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC037198.2-201ENST00000478845 733 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.08□□□□□ -1.76
SIX1Q15475 NAMPTP2-201ENST00000505629 1115 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC010374.2-201ENST00000512933 535 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AP003355.1-201ENST00000518956 587 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX1Q15475 CIR1P1-201ENST00000524055 1133 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX1Q15475 CYCSP29-201ENST00000533731 318 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.08□□□□□ -1.76
SIX1Q15475 AL049870.4-201ENST00000555741 486 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.08□□□□□ -1.76
SIX1Q15475 AC136624.4-201ENST00000573044 370 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC126365.2-201ENST00000580630 379 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 MIR3138-201ENST00000585238 82 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AL137072.1-201ENST00000603444 466 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC026741.1-201ENST00000605892 482 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
SIX1Q15475 MLECP1-201ENST00000615893 709 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC009704.2-201ENST00000618739 483 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AL627171.1-201ENST00000618845 1308 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 AC016717.3-201ENST00000624730 554 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 MIR6830-201ENST00000636015 70 ntBASIC4.08□□□□□ -1.76
SIX1Q15475 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIX1Q15475 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SIX1Q15475 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 RLIMP2-201ENST00000427891 1563 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 AC008432.1-201ENST00000615912 1320 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX1Q15475 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX1Q15475 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SIX1Q15475 AC068538.1-201ENST00000376856 336 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 BX664727.1-201ENST00000416024 466 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX1Q15475 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 SEC63P1-201ENST00000425785 1258 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 COX6CP15-201ENST00000426313 211 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SIX1Q15475 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SIX1Q15475 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX1Q15475 UQCRHP4-201ENST00000471686 272 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 AC083829.1-201ENST00000503756 657 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 RN7SKP122-201ENST00000515923 296 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX1Q15475 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 HIGD1AP18-201ENST00000520730 278 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX1Q15475 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.07□□□□□ -1.76
SIX1Q15475 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.07□□□□□ -1.76
SIX1Q15475 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX1Q15475 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 AL591424.2-201ENST00000617023 128 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 AC010608.2-201ENST00000624830 470 ntBASIC4.07□□□□□ -1.76
SIX1Q15475 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.07□□□□□ -1.76
SIX1Q15475 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX1Q15475 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX1Q15475 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIX1Q15475 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.07□□□□□ -1.76
SIX1Q15475 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIX1Q15475 AL356967.1-201ENST00000406305 431 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AL034374.1-201ENST00000406329 351 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 RN7SKP56-201ENST00000410513 331 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 RPL7AP73-201ENST00000413490 353 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX1Q15475 PNRC2P1-201ENST00000423940 420 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.06□□□□□ -1.76
SIX1Q15475 OR5BE1P-201ENST00000425977 939 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 HIGD1AP4-201ENST00000430194 280 ntBASIC4.06□□□□□ -1.76
SIX1Q15475 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX1Q15475 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX1Q15475 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.06□□□□□ -1.76
SIX1Q15475 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms