Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.56□□□□□ -1.68
GABPAQ06546 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
GABPAQ06546 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
GABPAQ06546 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 MIR670-201ENST00000390142 98 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
GABPAQ06546 AC007066.1-201ENST00000392902 381 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 RN7SKP222-201ENST00000410651 315 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 AC007000.2-201ENST00000442564 487 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.55□□□□□ -1.68
GABPAQ06546 VN1R34P-201ENST00000447387 883 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 RPS17P13-201ENST00000448974 407 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 UBE2CP3-201ENST00000502715 450 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 AC108120.2-201ENST00000512973 294 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 RNU1-95P-201ENST00000516357 160 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 RNU1-128P-201ENST00000516704 160 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 AC004923.2-201ENST00000529649 369 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 CCNG2P1-201ENST00000549521 1000 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.55□□□□□ -1.68
GABPAQ06546 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.55□□□□□ -1.68
GABPAQ06546 AL391834.1-201ENST00000609609 560 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.55□□□□□ -1.68
GABPAQ06546 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
GABPAQ06546 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.55□□□□□ -1.68
GABPAQ06546 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 CASC19-284ENST00000642142 1868 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
GABPAQ06546 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
GABPAQ06546 ZNF285B-201ENST00000561698 1767 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
GABPAQ06546 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.55□□□□□ -1.68
GABPAQ06546 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 SOD2P1-201ENST00000396543 562 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 AL353692.2-201ENST00000407054 335 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 AL590762.3-201ENST00000436372 640 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 AL513321.1-201ENST00000441175 761 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 CASP3P1-201ENST00000446037 609 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.54□□□□□ -1.68
GABPAQ06546 AC091153.1-201ENST00000466297 402 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 AC108729.2-201ENST00000476543 840 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 snoU109.6-201ENST00000516831 118 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.54□□□□□ -1.68
GABPAQ06546 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.54□□□□□ -1.68
GABPAQ06546 OR4A12P-201ENST00000530847 918 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.54□□□□□ -1.68
GABPAQ06546 GTF2IP22-201ENST00000554443 182 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 SULT1C2P2-201ENST00000562517 294 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.54□□□□□ -1.68
GABPAQ06546 MIR5187-201ENST00000583479 76 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 BNIP3P33-201ENST00000598912 569 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 SNORA51-201ENST00000606420 132 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.54□□□□□ -1.68
GABPAQ06546 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 AC011266.1-201ENST00000624119 3569 ntBASIC4.54□□□□□ -1.68
GABPAQ06546 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
GABPAQ06546 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GABPAQ06546 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GABPAQ06546 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.53□□□□□ -1.68
GABPAQ06546 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.53□□□□□ -1.68
GABPAQ06546 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.53□□□□□ -1.68
GABPAQ06546 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GABPAQ06546 MIR449B-201ENST00000384995 97 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 AL357078.2-201ENST00000416486 427 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 TCEA1P2-201ENST00000420496 906 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 DPY19L1P2-201ENST00000426647 915 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms