Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CL1P78423 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.89□□□□□ -1.79
CX3CL1P78423 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CX3CL1P78423 SAGE2P-201ENST00000420011 2126 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 MAPK10-304ENST00000641341 3984 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CX3CL1P78423 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CX3CL1P78423 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CL1P78423 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.89□□□□□ -1.79
CX3CL1P78423 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 RNU6-251P-201ENST00000363235 104 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AL357515.1-201ENST00000402967 542 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 GTF2IP5-201ENST00000414608 731 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 CHEK2P3-201ENST00000416118 248 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 TBCAP2-201ENST00000416175 326 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 CYCSP10-201ENST00000417973 294 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 MTND2P16-201ENST00000419987 799 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 RBMY2QP-201ENST00000429799 1147 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 HIGD1AP4-201ENST00000430194 280 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 UBE2V1P1-201ENST00000430836 445 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 NMNAT1P2-201ENST00000435192 860 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.89□□□□□ -1.79
CX3CL1P78423 RPS26P2-201ENST00000440331 348 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 RPS26P56-201ENST00000444468 240 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 MRPL48P1-201ENST00000445390 636 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 MTCO2P25-201ENST00000447065 681 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CL1P78423 NIP7P2-201ENST00000485801 544 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC116353.3-201ENST00000511215 249 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC134698.5-201ENST00000519444 336 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC027309.2-201ENST00000520566 192 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 C1GALT1P3-201ENST00000522049 819 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.89□□□□□ -1.79
CX3CL1P78423 CYCSP28-201ENST00000534284 321 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 OR5AN2P-201ENST00000534535 896 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC005868.1-201ENST00000536421 331 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.89□□□□□ -1.79
CX3CL1P78423 MTND3P12-201ENST00000559068 328 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC124068.1-201ENST00000563131 678 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 CYCSP40-201ENST00000575927 294 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 MIR4504-201ENST00000577413 92 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 RN7SL176P-201ENST00000580352 264 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CL1P78423 uc_338.18-201ENST00000615451 175 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC098679.5-201ENST00000624394 571 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.89□□□□□ -1.79
CX3CL1P78423 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CX3CL1P78423 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CX3CL1P78423 DHX9P1-201ENST00000436565 3076 ntBASIC3.89□□□□□ -1.79
CX3CL1P78423 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CL1P78423 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CL1P78423 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CX3CL1P78423 AC008758.3-201ENST00000507003 1829 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.88□□□□□ -1.79
CX3CL1P78423 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CL1P78423 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CL1P78423 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CL1P78423 AC092435.4-201ENST00000623012 4159 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.88□□□□□ -1.79
CX3CL1P78423 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CL1P78423 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CL1P78423 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CX3CL1P78423 RN7SKP95-201ENST00000362860 303 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 RNA5SP123-201ENST00000363244 119 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 SNORD113-6-201ENST00000363345 75 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 RNU6-1214P-201ENST00000363650 109 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CX3CL1P78423 RNU6-441P-201ENST00000384545 106 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 AL645927.1-201ENST00000396783 406 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CL1P78423 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.88□□□□□ -1.79
CX3CL1P78423 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.88□□□□□ -1.79
CX3CL1P78423 CKS1BP6-201ENST00000424932 240 ntBASIC3.88□□□□□ -1.79
CX3CL1P78423 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.88□□□□□ -1.79
CX3CL1P78423 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms