Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.23□□□□□ -2.05
RPS28P62857 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 AC091304.5-201ENST00000568969 158 ntBASIC2.23□□□□□ -2.05
RPS28P62857 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC2.23□□□□□ -2.05
RPS28P62857 KLKP1-201ENST00000595979 403 ntBASIC2.23□□□□□ -2.05
RPS28P62857 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 AC103881.1-201ENST00000603476 538 ntBASIC2.23□□□□□ -2.05
RPS28P62857 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC2.23□□□□□ -2.05
RPS28P62857 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.23□□□□□ -2.05
RPS28P62857 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 MIR6785-201ENST00000618984 81 ntBASIC2.23□□□□□ -2.05
RPS28P62857 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 MIR6733-201ENST00000635723 61 ntBASIC2.23□□□□□ -2.05
RPS28P62857 ATE1-AS1-202ENST00000636460 506 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
RPS28P62857 AL390039.1-201ENST00000399148 611 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 PRELID1P1-201ENST00000403549 660 ntBASIC2.22□□□□□ -2.05
RPS28P62857 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 MIR1182-201ENST00000408363 97 ntBASIC2.22□□□□□ -2.05
RPS28P62857 RNA5SP203-201ENST00000410451 136 ntBASIC2.22□□□□□ -2.05
RPS28P62857 RN7SKP168-201ENST00000410910 300 ntBASIC2.22□□□□□ -2.05
RPS28P62857 RN7SKP270-201ENST00000411297 312 ntBASIC2.22□□□□□ -2.05
RPS28P62857 PGBD4P8-201ENST00000412993 562 ntBASIC2.22□□□□□ -2.05
RPS28P62857 TBCAP2-201ENST00000416175 326 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 HSFY1P1-201ENST00000423928 1178 ntBASIC2.22□□□□□ -2.05
RPS28P62857 PPIL1P1-201ENST00000423936 499 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
RPS28P62857 AL645936.1-201ENST00000441979 518 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC019185.1-201ENST00000442718 389 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 AL121578.2-201ENST00000448797 447 ntBASIC2.22□□□□□ -2.05
RPS28P62857 DBIL5P-202ENST00000453414 250 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 snoU13.3-201ENST00000459441 104 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC063943.1-201ENST00000465434 453 ntBASIC2.22□□□□□ -2.05
RPS28P62857 RN7SL97P-201ENST00000486780 299 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC013356.1-201ENST00000489027 564 ntBASIC2.22□□□□□ -2.05
RPS28P62857 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 AC112484.3-201ENST00000505910 329 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC008638.1-201ENST00000506035 866 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC2.22□□□□□ -2.05
RPS28P62857 RNA5SP76-201ENST00000516277 87 ntBASIC2.22□□□□□ -2.05
RPS28P62857 IGLVVII-41-1-201ENST00000518405 151 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 IGLV3-30-201ENST00000524362 298 ntBASIC2.22□□□□□ -2.05
RPS28P62857 OR10V3P-201ENST00000525712 725 ntBASIC2.22□□□□□ -2.05
RPS28P62857 HMGN2P36-201ENST00000529541 409 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC004923.2-201ENST00000529649 369 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AP002404.1-201ENST00000532005 451 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.22□□□□□ -2.05
RPS28P62857 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 AL391156.1-201ENST00000554965 554 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AL049870.4-201ENST00000555741 486 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.22□□□□□ -2.05
RPS28P62857 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC2.22□□□□□ -2.05
RPS28P62857 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC2.22□□□□□ -2.05
RPS28P62857 MIR4715-201ENST00000584117 79 ntBASIC2.22□□□□□ -2.05
RPS28P62857 OR4G1P-201ENST00000588632 938 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 AC010620.2-201ENST00000600135 313 ntBASIC2.22□□□□□ -2.05
RPS28P62857 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC2.22□□□□□ -2.05
RPS28P62857 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 AC012119.1-201ENST00000603184 222 ntBASIC2.22□□□□□ -2.05
RPS28P62857 HMGB1P51-201ENST00000605166 638 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AL356218.2-201ENST00000605264 187 ntBASIC2.22□□□□□ -2.05
RPS28P62857 AC126175.1-201ENST00000617041 758 ntBASIC2.22□□□□□ -2.05
RPS28P62857 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPS28P62857 pRNA.9-201ENST00000618609 89 ntBASIC2.22□□□□□ -2.05
RPS28P62857 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.22□□□□□ -2.05
RPS28P62857 AC244100.1-202ENST00000621554 382 ntBASIC2.22□□□□□ -2.05
RPS28P62857 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms