Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPS4XP62701 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPS4XP62701 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.9□□□□□ -1.79
RPS4XP62701 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPS4XP62701 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPS4XP62701 MTCO1P6-201ENST00000481192 1384 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RPS4XP62701 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.89□□□□□ -1.79
RPS4XP62701 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 Y_RNA.126-201ENST00000363382 111 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.89□□□□□ -1.79
RPS4XP62701 SNORA70C-201ENST00000384538 135 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 RNU6-932P-201ENST00000391108 106 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.89□□□□□ -1.79
RPS4XP62701 OR2X1P-201ENST00000421144 687 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS4XP62701 MRPL50P1-201ENST00000431951 384 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AL132765.1-201ENST00000434165 553 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 HMGB3P9-201ENST00000441799 583 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 PHBP16-201ENST00000446318 950 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.89□□□□□ -1.79
RPS4XP62701 MRPL35P4-201ENST00000453682 566 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.89□□□□□ -1.79
RPS4XP62701 RPL21P18-201ENST00000469899 480 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 RPS4XP6-201ENST00000477670 797 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS4XP62701 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS4XP62701 MTCO1P35-201ENST00000515270 228 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS4XP62701 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.89□□□□□ -1.79
RPS4XP62701 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 AC006064.5-201ENST00000541782 248 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
RPS4XP62701 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS4XP62701 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS4XP62701 MIR3160-1-201ENST00000577972 85 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.89□□□□□ -1.79
RPS4XP62701 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.89□□□□□ -1.79
RPS4XP62701 AC133552.5-201ENST00000604266 540 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AC010857.1-201ENST00000606398 594 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AC114781.5-201ENST00000615297 108 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.89□□□□□ -1.79
RPS4XP62701 AL109620.1-201ENST00000618738 1197 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AC018926.3-201ENST00000618841 406 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 LINC01109-201ENST00000603837 3081 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AC022893.2-201ENST00000564832 3296 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.89□□□□□ -1.79
RPS4XP62701 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.89□□□□□ -1.79
RPS4XP62701 AL136520.1-201ENST00000600311 1322 ntBASIC3.89□□□□□ -1.79
RPS4XP62701 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPS4XP62701 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS4XP62701 AC073055.1-201ENST00000456901 1621 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPS4XP62701 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RPS4XP62701 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS4XP62701 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RPS4XP62701 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
RPS4XP62701 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RPS4XP62701 SNORA51.12-201ENST00000384448 134 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 RPS26P8-201ENST00000393490 348 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 DNAJC19P6-201ENST00000401853 280 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 AL355615.1-201ENST00000406187 641 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 HNRNPDP2-201ENST00000406475 478 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS4XP62701 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS4XP62701 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS4XP62701 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.88□□□□□ -1.79
RPS4XP62701 TMSB10P2-201ENST00000416049 131 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 AC114814.2-201ENST00000419195 485 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPS4XP62701 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.88□□□□□ -1.79
RPS4XP62701 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 RPS27AP12-201ENST00000429552 465 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 RPS29P17-201ENST00000430795 166 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 AC023347.2-201ENST00000433994 462 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 UBE2V1P5-201ENST00000440070 405 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 GXYLT1P1-201ENST00000446657 490 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPS4XP62701 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.88□□□□□ -1.79
RPS4XP62701 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.88□□□□□ -1.79
RPS4XP62701 BNIP3P41-201ENST00000503774 571 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 NAMPTP2-201ENST00000505629 1115 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 PARP4P3-201ENST00000510265 317 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 SNORA31.9-201ENST00000516429 84 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS4XP62701 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.88□□□□□ -1.79
RPS4XP62701 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.88□□□□□ -1.79
RPS4XP62701 AC074050.1-201ENST00000563247 211 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 AC007224.1-201ENST00000564410 144 ntBASIC3.88□□□□□ -1.79
RPS4XP62701 HNRNPCP4-201ENST00000571636 900 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms