Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU1-64P-201ENST00000365443 163 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 RNU6-650P-201ENST00000365658 111 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 RPL32P23-201ENST00000397237 405 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 HSPE1P12-201ENST00000412576 301 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 EIF4EP1-201ENST00000422311 642 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.84□□□□□ -1.79
EFNA3P52797 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.84□□□□□ -1.79
EFNA3P52797 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.84□□□□□ -1.79
EFNA3P52797 RBMY1KP-201ENST00000423480 476 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.84□□□□□ -1.79
EFNA3P52797 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.84□□□□□ -1.79
EFNA3P52797 RPL23AP46-201ENST00000438548 490 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 RPS4XP4-201ENST00000443195 763 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC069540.1-201ENST00000446320 988 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AL162151.2-201ENST00000448875 158 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.84□□□□□ -1.79
EFNA3P52797 EIF4A1P11-201ENST00000451239 222 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.84□□□□□ -1.79
EFNA3P52797 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.84□□□□□ -1.79
EFNA3P52797 HPRT1P2-201ENST00000505250 544 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
EFNA3P52797 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.84□□□□□ -1.79
EFNA3P52797 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.84□□□□□ -1.79
EFNA3P52797 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
EFNA3P52797 CIR1P1-201ENST00000524055 1133 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.84□□□□□ -1.79
EFNA3P52797 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.84□□□□□ -1.79
EFNA3P52797 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.84□□□□□ -1.79
EFNA3P52797 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.84□□□□□ -1.79
EFNA3P52797 AL121834.1-201ENST00000572284 509 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.84□□□□□ -1.79
EFNA3P52797 MIR5684-201ENST00000585074 65 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC022916.3-201ENST00000592961 742 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 RNU4-89P-201ENST00000607443 133 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC092574.1-201ENST00000609771 420 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AL133445.2-201ENST00000611191 527 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AL512506.1-201ENST00000613918 449 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AL445493.3-201ENST00000619568 477 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC103798.2-201ENST00000624292 632 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AP003400.6-201ENST00000624698 740 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.84□□□□□ -1.79
EFNA3P52797 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
EFNA3P52797 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.84□□□□□ -1.79
EFNA3P52797 GTF2H2B-203ENST00000508065 1432 ntBASIC3.84□□□□□ -1.79
EFNA3P52797 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
EFNA3P52797 FAM91A3P-201ENST00000456826 2544 ntBASIC3.84□□□□□ -1.8
EFNA3P52797 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.84□□□□□ -1.8
EFNA3P52797 IQCB2P-201ENST00000401788 1633 ntBASIC3.84□□□□□ -1.8
EFNA3P52797 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
EFNA3P52797 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.84□□□□□ -1.8
EFNA3P52797 RNF6P1-201ENST00000444889 1784 ntBASIC3.84□□□□□ -1.8
EFNA3P52797 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
EFNA3P52797 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
EFNA3P52797 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 RNU1-108P-201ENST00000362556 161 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.83□□□□□ -1.8
EFNA3P52797 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.83□□□□□ -1.8
EFNA3P52797 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
EFNA3P52797 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
EFNA3P52797 HMGB1P10-201ENST00000395823 563 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 HMGB1P13-201ENST00000406019 642 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 RNU4-6P-201ENST00000410804 122 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AC013404.1-201ENST00000413068 249 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 TATDN1P1-201ENST00000414123 891 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 RPS23P10-201ENST00000416185 486 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 MTND4P11-201ENST00000417020 1058 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 LINC01347-201ENST00000417964 355 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.83□□□□□ -1.8
EFNA3P52797 AL158073.1-201ENST00000426848 1104 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.83□□□□□ -1.8
EFNA3P52797 AL031663.1-201ENST00000437445 219 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 CBX1P4-201ENST00000439415 457 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.83□□□□□ -1.8
EFNA3P52797 AC104306.1-201ENST00000449702 371 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 NDUFS5P3-201ENST00000450668 321 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 RPS11P1-201ENST00000451072 473 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 TPT1P3-201ENST00000492841 512 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
EFNA3P52797 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.83□□□□□ -1.8
EFNA3P52797 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.83□□□□□ -1.8
EFNA3P52797 SNORA76.2-201ENST00000517095 137 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 IGLVIV-53-201ENST00000520107 367 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.83□□□□□ -1.8
EFNA3P52797 MTND1P36-201ENST00000522384 936 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AC063950.1-201ENST00000552036 308 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AC079148.1-201ENST00000565944 819 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 ZNF92P3-201ENST00000596594 954 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.83□□□□□ -1.8
EFNA3P52797 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.83□□□□□ -1.8
EFNA3P52797 AC025946.2-201ENST00000603398 234 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.83□□□□□ -1.8
EFNA3P52797 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.83□□□□□ -1.8
EFNA3P52797 OR6R2P-201ENST00000609216 300 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 AC116447.1-201ENST00000613153 453 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms