Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLCN3P51790 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CLCN3P51790 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCN3P51790 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLCN3P51790 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 SNORA11-201ENST00000408789 128 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCN3P51790 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCN3P51790 AC009302.1-201ENST00000417147 390 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 RPL17P36-201ENST00000420302 549 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC099336.2-201ENST00000422457 254 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCN3P51790 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.72□□□□□ -1.65
CLCN3P51790 AC073069.1-201ENST00000428657 441 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 CEACAMP1-201ENST00000434624 1035 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 PPIAP13-201ENST00000434706 478 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCN3P51790 ELOCP10-201ENST00000440624 327 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCN3P51790 MTND2P8-201ENST00000450555 1025 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC099560.2-201ENST00000457554 255 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC068587.2-201ENST00000478386 781 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 RN7SL809P-201ENST00000482040 297 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC090013.1-201ENST00000485147 480 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 KCTD9P2-201ENST00000512203 1013 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 RNU6-276P-201ENST00000516114 96 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AP001207.2-201ENST00000519490 539 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC010306.1-201ENST00000523223 1117 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCN3P51790 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.72□□□□□ -1.65
CLCN3P51790 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.72□□□□□ -1.65
CLCN3P51790 MIR4509-3-201ENST00000578671 94 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC090312.2-201ENST00000582687 378 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 MIR4509-2-201ENST00000583920 94 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 VN1R88P-201ENST00000596787 292 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 ELOCP34-201ENST00000604436 327 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC073387.2-201ENST00000604797 784 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC010200.2-201ENST00000605098 235 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC013468.1-201ENST00000608680 598 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCN3P51790 MIR4509-1-201ENST00000618224 94 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AP001005.3-201ENST00000622049 129 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AL078595.3-201ENST00000623815 1166 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.72□□□□□ -1.65
CLCN3P51790 AC008013.2-202ENST00000637965 364 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 AC022031.1-201ENST00000585985 2593 ntBASIC4.72□□□□□ -1.65
CLCN3P51790 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CLCN3P51790 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CLCN3P51790 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLCN3P51790 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.72□□□□□ -1.65
CLCN3P51790 AC107027.3-201ENST00000565095 3473 ntBASIC4.71□□□□□ -1.65
CLCN3P51790 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.71□□□□□ -1.65
CLCN3P51790 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CLCN3P51790 AC046144.1-201ENST00000478559 1853 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCN3P51790 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 SPRR2C-201ENST00000290702 219 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 OR52E6-202ENST00000379946 954 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 AL078604.1-201ENST00000404609 466 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 AC092638.1-201ENST00000411966 1275 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.71□□□□□ -1.66
CLCN3P51790 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.71□□□□□ -1.66
CLCN3P51790 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.71□□□□□ -1.66
CLCN3P51790 AC246680.2-201ENST00000422106 389 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 AL132765.1-201ENST00000434165 553 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.71□□□□□ -1.66
CLCN3P51790 RPS27AP15-201ENST00000447672 466 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLCN3P51790 DUXAP8-207ENST00000456786 622 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.71□□□□□ -1.66
CLCN3P51790 AL035404.1-201ENST00000497982 568 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.71□□□□□ -1.66
CLCN3P51790 RN7SKP46-201ENST00000515942 234 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 RNU6-347P-201ENST00000516658 105 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 MIR2116-201ENST00000517221 80 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.71□□□□□ -1.66
CLCN3P51790 OR7E13P-201ENST00000526052 910 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.71□□□□□ -1.66
CLCN3P51790 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.71□□□□□ -1.66
CLCN3P51790 AC087897.1-201ENST00000550134 156 ntBASIC4.71□□□□□ -1.66
CLCN3P51790 SETP1-201ENST00000556014 845 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms