Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.53□□□□□ -1.68
GPC3P51654 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
GPC3P51654 AC011266.1-201ENST00000624119 3569 ntBASIC4.53□□□□□ -1.68
GPC3P51654 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.53□□□□□ -1.68
GPC3P51654 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
GPC3P51654 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GPC3P51654 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GPC3P51654 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.52□□□□□ -1.69
GPC3P51654 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
GPC3P51654 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 SNORD115-48-201ENST00000364764 76 ntBASIC4.52□□□□□ -1.69
GPC3P51654 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
GPC3P51654 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 NPM1P10-201ENST00000398310 865 ntBASIC4.52□□□□□ -1.69
GPC3P51654 RN7SKP27-201ENST00000410684 333 ntBASIC4.52□□□□□ -1.69
GPC3P51654 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.52□□□□□ -1.69
GPC3P51654 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 MTCO3P4-201ENST00000419236 787 ntBASIC4.52□□□□□ -1.69
GPC3P51654 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.52□□□□□ -1.69
GPC3P51654 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.52□□□□□ -1.69
GPC3P51654 AL645939.1-201ENST00000453429 797 ntBASIC4.52□□□□□ -1.69
GPC3P51654 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.52□□□□□ -1.69
GPC3P51654 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.52□□□□□ -1.69
GPC3P51654 RN7SL585P-201ENST00000470538 280 ntBASIC4.52□□□□□ -1.69
GPC3P51654 AC010460.1-201ENST00000507087 466 ntBASIC4.52□□□□□ -1.69
GPC3P51654 OR5M7P-201ENST00000526140 972 ntBASIC4.52□□□□□ -1.69
GPC3P51654 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.52□□□□□ -1.69
GPC3P51654 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.52□□□□□ -1.69
GPC3P51654 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.52□□□□□ -1.69
GPC3P51654 MIR5684-201ENST00000585074 65 ntBASIC4.52□□□□□ -1.69
GPC3P51654 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GPC3P51654 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.52□□□□□ -1.69
GPC3P51654 CDRT1-208ENST00000630868 794 ntBASIC4.52□□□□□ -1.69
GPC3P51654 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
GPC3P51654 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GPC3P51654 AL133412.1-201ENST00000380194 2992 ntBASIC4.52□□□□□ -1.69
GPC3P51654 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GPC3P51654 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GPC3P51654 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
GPC3P51654 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.51□□□□□ -1.69
GPC3P51654 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 ERCC6-202ENST00000374127 1782 ntBASIC4.51□□□□□ -1.69
GPC3P51654 AC022031.1-201ENST00000585985 2593 ntBASIC4.51□□□□□ -1.69
GPC3P51654 RNA5SP52-201ENST00000362448 134 ntBASIC4.51□□□□□ -1.69
GPC3P51654 U3.15-201ENST00000365398 212 ntBASIC4.51□□□□□ -1.69
GPC3P51654 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 RNU4-6P-201ENST00000410804 122 ntBASIC4.51□□□□□ -1.69
GPC3P51654 AC114814.2-201ENST00000419195 485 ntBASIC4.51□□□□□ -1.69
GPC3P51654 RPS4XP4-201ENST00000443195 763 ntBASIC4.51□□□□□ -1.69
GPC3P51654 AC104306.1-201ENST00000449702 371 ntBASIC4.51□□□□□ -1.69
GPC3P51654 MTND3P4-201ENST00000453537 303 ntBASIC4.51□□□□□ -1.69
GPC3P51654 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.51□□□□□ -1.69
GPC3P51654 AC006517.1-201ENST00000480485 328 ntBASIC4.51□□□□□ -1.69
GPC3P51654 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.51□□□□□ -1.69
GPC3P51654 KRT19P6-201ENST00000510983 209 ntBASIC4.51□□□□□ -1.69
GPC3P51654 AC018797.3-201ENST00000513388 1241 ntBASIC4.51□□□□□ -1.69
GPC3P51654 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.51□□□□□ -1.69
GPC3P51654 AC034105.4-201ENST00000568304 277 ntBASIC4.51□□□□□ -1.69
GPC3P51654 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.51□□□□□ -1.69
GPC3P51654 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.51□□□□□ -1.69
GPC3P51654 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
GPC3P51654 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.51□□□□□ -1.69
GPC3P51654 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
GPC3P51654 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GPC3P51654 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GPC3P51654 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
GPC3P51654 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GPC3P51654 DCAF13P3-201ENST00000561147 1334 ntBASIC4.5□□□□□ -1.69
GPC3P51654 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
GPC3P51654 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
GPC3P51654 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GPC3P51654 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.5□□□□□ -1.69
GPC3P51654 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GPC3P51654 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
GPC3P51654 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GPC3P51654 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GPC3P51654 RNU6-883P-201ENST00000384597 107 ntBASIC4.5□□□□□ -1.69
GPC3P51654 HMGB1P10-201ENST00000395823 563 ntBASIC4.5□□□□□ -1.69
GPC3P51654 AC010385.1-201ENST00000412374 256 ntBASIC4.5□□□□□ -1.69
GPC3P51654 AC004022.2-201ENST00000413824 193 ntBASIC4.5□□□□□ -1.69
GPC3P51654 RAC1P3-201ENST00000416129 580 ntBASIC4.5□□□□□ -1.69
GPC3P51654 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
GPC3P51654 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.5□□□□□ -1.69
GPC3P51654 TRIM60P13-201ENST00000432350 1283 ntBASIC4.5□□□□□ -1.69
GPC3P51654 AC023347.2-201ENST00000433994 462 ntBASIC4.5□□□□□ -1.69
GPC3P51654 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.5□□□□□ -1.69
GPC3P51654 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GPC3P51654 AC105402.2-201ENST00000438503 358 ntBASIC4.5□□□□□ -1.69
GPC3P51654 AC239367.2-201ENST00000447309 705 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms