Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.21□□□□□ -1.74
CASP4P49662 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CASP4P49662 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.21□□□□□ -1.74
CASP4P49662 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CASP4P49662 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CASP4P49662 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASP4P49662 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASP4P49662 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASP4P49662 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 SNORA27.3-201ENST00000364937 134 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC083799.1-201ENST00000366451 910 ntBASIC4.2□□□□□ -1.74
CASP4P49662 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASP4P49662 AL603766.1-201ENST00000407763 664 ntBASIC4.2□□□□□ -1.74
CASP4P49662 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.2□□□□□ -1.74
CASP4P49662 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.2□□□□□ -1.74
CASP4P49662 EIF2S2P3-201ENST00000428356 999 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.2□□□□□ -1.74
CASP4P49662 ATP5HP2-201ENST00000433885 485 ntBASIC4.2□□□□□ -1.74
CASP4P49662 RPS29P7-201ENST00000439662 171 ntBASIC4.2□□□□□ -1.74
CASP4P49662 RSL24D1P2-201ENST00000445584 366 ntBASIC4.2□□□□□ -1.74
CASP4P49662 YWHAQP9-201ENST00000445891 512 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.2□□□□□ -1.74
CASP4P49662 HMGB1P26-201ENST00000452520 628 ntBASIC4.2□□□□□ -1.74
CASP4P49662 RPL23AP12-201ENST00000467573 473 ntBASIC4.2□□□□□ -1.74
CASP4P49662 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.2□□□□□ -1.74
CASP4P49662 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.2□□□□□ -1.74
CASP4P49662 RAC1P2-201ENST00000511164 579 ntBASIC4.2□□□□□ -1.74
CASP4P49662 RNU6-1004P-201ENST00000516584 111 ntBASIC4.2□□□□□ -1.74
CASP4P49662 SCARNA14-201ENST00000516903 136 ntBASIC4.2□□□□□ -1.74
CASP4P49662 RNU6-889P-201ENST00000517189 103 ntBASIC4.2□□□□□ -1.74
CASP4P49662 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CASP4P49662 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 AC084757.1-201ENST00000559987 490 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC023158.1-201ENST00000561632 1025 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.2□□□□□ -1.74
CASP4P49662 AC092653.1-201ENST00000608509 531 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC026368.1-201ENST00000614934 690 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC016957.2-201ENST00000616998 848 ntBASIC4.2□□□□□ -1.74
CASP4P49662 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.2□□□□□ -1.74
CASP4P49662 AL731566.2-201ENST00000618971 317 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.2□□□□□ -1.74
CASP4P49662 FP236240.3-201ENST00000623061 327 ntBASIC4.2□□□□□ -1.74
CASP4P49662 AC007342.8-201ENST00000623278 678 ntBASIC4.2□□□□□ -1.74
CASP4P49662 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.2□□□□□ -1.74
CASP4P49662 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.2□□□□□ -1.74
CASP4P49662 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CASP4P49662 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASP4P49662 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.19□□□□□ -1.74
CASP4P49662 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CASP4P49662 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASP4P49662 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CASP4P49662 RN7SKP227-201ENST00000364445 330 ntBASIC4.19□□□□□ -1.74
CASP4P49662 GCNT6-201ENST00000379591 934 ntBASIC4.19□□□□□ -1.74
CASP4P49662 U1.1-201ENST00000384101 164 ntBASIC4.19□□□□□ -1.74
CASP4P49662 RNU4-31P-201ENST00000384211 141 ntBASIC4.19□□□□□ -1.74
CASP4P49662 RNU6-244P-201ENST00000391028 104 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC136624.1-201ENST00000400791 413 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.19□□□□□ -1.74
CASP4P49662 SNORA71B-202ENST00000439232 272 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AL500522.2-201ENST00000448562 343 ntBASIC4.19□□□□□ -1.74
CASP4P49662 MTND2P25-201ENST00000449028 610 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.19□□□□□ -1.74
CASP4P49662 OR9M1P-201ENST00000459641 921 ntBASIC4.19□□□□□ -1.74
CASP4P49662 RPL21P11-201ENST00000461458 483 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC084198.1-201ENST00000477747 402 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC068587.1-201ENST00000483613 781 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.19□□□□□ -1.74
CASP4P49662 AC022695.1-201ENST00000522089 237 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC090281.1-201ENST00000523019 276 ntBASIC4.19□□□□□ -1.74
CASP4P49662 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CASP4P49662 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.19□□□□□ -1.74
CASP4P49662 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 AC084824.1-201ENST00000550917 1005 ntBASIC4.19□□□□□ -1.74
CASP4P49662 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 AC012414.2-201ENST00000559474 187 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.19□□□□□ -1.74
CASP4P49662 AC053481.4-201ENST00000583164 216 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AL139286.1-201ENST00000604465 483 ntBASIC4.19□□□□□ -1.74
CASP4P49662 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.19□□□□□ -1.74
CASP4P49662 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.19□□□□□ -1.74
CASP4P49662 AL118496.1-201ENST00000440201 1812 ntBASIC4.18□□□□□ -1.74
CASP4P49662 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CASP4P49662 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CASP4P49662 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms