Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 OR51C1P-202ENST00000641159 1444 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 AL356489.2-201ENST00000566968 3528 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CXCL12P48061 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 SNORA48.2-201ENST00000390926 124 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 AC096664.2-201ENST00000411843 406 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 BOLA3P4-201ENST00000418151 400 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 IPMKP1-201ENST00000425988 855 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 CYCSP4-201ENST00000429682 331 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL12P48061 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 RPL21P10-201ENST00000463521 490 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 MTND6P6-201ENST00000478031 263 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC108941.1-201ENST00000502853 530 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC147055.1-201ENST00000509261 750 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 MIR8058-201ENST00000615737 89 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 AL355365.1-201ENST00000616480 294 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 AL158196.1-201ENST00000616786 434 ntBASIC3.78□□□□□ -1.8
CXCL12P48061 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.78□□□□□ -1.8
CXCL12P48061 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL12P48061 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL12P48061 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC009229.4-201ENST00000623854 1947 ntBASIC3.78□□□□□ -1.81
CXCL12P48061 AL365440.1-201ENST00000436135 2167 ntBASIC3.78□□□□□ -1.81
CXCL12P48061 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.81
CXCL12P48061 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.78□□□□□ -1.81
CXCL12P48061 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL12P48061 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL12P48061 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL12P48061 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL12P48061 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL12P48061 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL12P48061 RNU6-1320P-201ENST00000390838 107 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 RNU6-1269P-201ENST00000391139 107 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 RN7SKP199-201ENST00000410325 305 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.77□□□□□ -1.81
CXCL12P48061 AL691447.1-201ENST00000419456 387 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL12P48061 RNU6-599P-201ENST00000459383 107 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 RNU6-1193P-201ENST00000459461 107 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 RN7SL585P-201ENST00000470538 280 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.77□□□□□ -1.81
CXCL12P48061 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.77□□□□□ -1.81
CXCL12P48061 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL12P48061 NPM1P52-201ENST00000518264 846 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL12P48061 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL12P48061 HIGD1AP18-201ENST00000520730 278 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.77□□□□□ -1.81
CXCL12P48061 AC107016.1-201ENST00000550463 337 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.77□□□□□ -1.81
CXCL12P48061 AC011611.1-201ENST00000552179 197 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 AC007599.1-201ENST00000568688 1174 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.77□□□□□ -1.81
CXCL12P48061 RNU6-368P-201ENST00000620928 107 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 RNU6-538P-201ENST00000622329 107 ntBASIC3.77□□□□□ -1.81
CXCL12P48061 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.77□□□□□ -1.81
CXCL12P48061 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CXCL12P48061 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.76□□□□□ -1.81
CXCL12P48061 HSPD1P11-201ENST00000508643 1702 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CXCL12P48061 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CXCL12P48061 MIR708-201ENST00000390708 88 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 RNA5SP120-201ENST00000410900 112 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.76□□□□□ -1.81
CXCL12P48061 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.76□□□□□ -1.81
CXCL12P48061 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.76□□□□□ -1.81
CXCL12P48061 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.76□□□□□ -1.81
CXCL12P48061 RPS4XP10-201ENST00000465034 731 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 RPL6P9-201ENST00000466502 859 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms