Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC8P31273 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HOXC8P31273 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC8P31273 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXC8P31273 RPL21P65-201ENST00000406094 466 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 RNU6-628P-201ENST00000410675 107 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AC108032.1-201ENST00000416706 207 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AC073136.2-201ENST00000417282 849 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AC115285.1-201ENST00000424879 736 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AL031736.2-201ENST00000426573 787 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 ELOCP11-201ENST00000436690 332 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AL645931.1-201ENST00000439737 410 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 ELOCP16-201ENST00000444494 332 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AL162151.2-201ENST00000448875 158 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 RPL21P47-201ENST00000483696 477 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AC090013.1-201ENST00000485147 480 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AC108729.1-201ENST00000487812 947 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 RPS4XP18-201ENST00000495480 763 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HOXC8P31273 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC8P31273 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC8P31273 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC8P31273 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC8P31273 MIR4286-201ENST00000580651 93 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 AC112503.2-201ENST00000609005 552 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 OR4G3P-201ENST00000633500 913 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 BMS1P21-201ENST00000634565 365 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXC8P31273 U6.107-201ENST00000637108 79 ntBASIC4.67□□□□□ -1.66
HOXC8P31273 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
HOXC8P31273 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC8P31273 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
HOXC8P31273 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC8P31273 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC8P31273 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
HOXC8P31273 AC022031.1-201ENST00000585985 2593 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC8P31273 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC8P31273 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HOXC8P31273 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC8P31273 AL049555.1-201ENST00000562834 1933 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
HOXC8P31273 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC8P31273 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
HOXC8P31273 RNU1-85P-201ENST00000364127 164 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 RNU1-44P-201ENST00000384453 163 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 MIR122-201ENST00000385044 85 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 RNU11-4P-201ENST00000391149 133 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC8P31273 VDAC1P9-201ENST00000412766 841 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 TPT1P2-201ENST00000413105 503 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 HMGB3P31-201ENST00000413333 595 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 CEACAMP8-201ENST00000413902 580 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AL158050.1-201ENST00000416077 457 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXC8P31273 AL389915.1-201ENST00000422463 466 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC8P31273 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC8P31273 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXC8P31273 AL512661.1-201ENST00000434586 1253 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 CEACAMP1-201ENST00000434624 1035 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC8P31273 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXC8P31273 RPS7P5-201ENST00000441482 581 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 HMGB3P9-201ENST00000441799 583 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 Z95327.1-201ENST00000446082 482 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AL606517.1-201ENST00000446914 387 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC8P31273 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC8P31273 SETP6-201ENST00000479329 568 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 VN1R105P-201ENST00000486595 910 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC8P31273 RN7SL604P-201ENST00000492589 296 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC8P31273 SNORA67.7-201ENST00000516664 135 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXC8P31273 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXC8P31273 HMGB1P23-201ENST00000518743 568 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 C1DP5-201ENST00000525775 383 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXC8P31273 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC8P31273 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXC8P31273 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HOXC8P31273 HMGB3P26-201ENST00000560051 582 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 HNRNPCP4-201ENST00000571636 900 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXC8P31273 MIR4444-1-201ENST00000581696 74 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC090312.2-201ENST00000582687 378 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 MIR3936-201ENST00000584304 110 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 MIR4444-2-201ENST00000584390 74 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AC012254.4-201ENST00000588843 273 ntBASIC4.66□□□□□ -1.66
HOXC8P31273 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms