Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NANOGP5-201ENST00000424456 877 ntBASIC3.9□□□□□ -1.79
SHC1P29353 XKRYP2-201ENST00000432915 492 ntBASIC3.9□□□□□ -1.79
SHC1P29353 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.9□□□□□ -1.79
SHC1P29353 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.9□□□□□ -1.79
SHC1P29353 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.9□□□□□ -1.79
SHC1P29353 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.9□□□□□ -1.79
SHC1P29353 RPL7AP52-201ENST00000458096 790 ntBASIC3.9□□□□□ -1.79
SHC1P29353 SYT14P1-201ENST00000481459 721 ntBASIC3.9□□□□□ -1.79
SHC1P29353 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.9□□□□□ -1.79
SHC1P29353 AC021146.7-201ENST00000509604 775 ntBASIC3.9□□□□□ -1.79
SHC1P29353 AC093840.1-201ENST00000511599 336 ntBASIC3.9□□□□□ -1.79
SHC1P29353 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.9□□□□□ -1.79
SHC1P29353 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.9□□□□□ -1.79
SHC1P29353 HNRNPKP5-201ENST00000515300 253 ntBASIC3.9□□□□□ -1.79
SHC1P29353 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.9□□□□□ -1.79
SHC1P29353 OR5M7P-201ENST00000526140 972 ntBASIC3.9□□□□□ -1.79
SHC1P29353 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 AL352979.3-201ENST00000553515 247 ntBASIC3.9□□□□□ -1.79
SHC1P29353 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 AC090515.3-201ENST00000560431 315 ntBASIC3.9□□□□□ -1.79
SHC1P29353 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.9□□□□□ -1.79
SHC1P29353 CBX3P2-202ENST00000583365 535 ntBASIC3.9□□□□□ -1.79
SHC1P29353 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.9□□□□□ -1.79
SHC1P29353 AC106052.1-201ENST00000608029 497 ntBASIC3.9□□□□□ -1.79
SHC1P29353 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.9□□□□□ -1.79
SHC1P29353 AC026368.1-201ENST00000614934 690 ntBASIC3.9□□□□□ -1.79
SHC1P29353 AP000843.1-201ENST00000624880 701 ntBASIC3.9□□□□□ -1.79
SHC1P29353 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 AC140479.6-201ENST00000633535 357 ntBASIC3.9□□□□□ -1.79
SHC1P29353 AC132825.7-201ENST00000638744 335 ntBASIC3.9□□□□□ -1.79
SHC1P29353 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.9□□□□□ -1.79
SHC1P29353 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.9□□□□□ -1.79
SHC1P29353 AL158163.1-201ENST00000603915 1649 ntBASIC3.9□□□□□ -1.79
SHC1P29353 ZNF90P1-201ENST00000480493 1951 ntBASIC3.9□□□□□ -1.79
SHC1P29353 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.9□□□□□ -1.79
SHC1P29353 MFSD8-213ENST00000641134 1327 ntBASIC3.9□□□□□ -1.79
SHC1P29353 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.9□□□□□ -1.79
SHC1P29353 ZNF962P-201ENST00000443465 3140 ntBASIC3.9□□□□□ -1.79
SHC1P29353 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SHC1P29353 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHC1P29353 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 AC009313.2-201ENST00000417893 1941 ntBASIC3.89□□□□□ -1.79
SHC1P29353 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHC1P29353 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHC1P29353 RNA5SP502-201ENST00000362694 119 ntBASIC3.89□□□□□ -1.79
SHC1P29353 RNU1-132P-201ENST00000364300 164 ntBASIC3.89□□□□□ -1.79
SHC1P29353 RNU4-40P-201ENST00000364351 143 ntBASIC3.89□□□□□ -1.79
SHC1P29353 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 AC234772.1-201ENST00000377927 937 ntBASIC3.89□□□□□ -1.79
SHC1P29353 SNORD66.1-201ENST00000391230 76 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.89□□□□□ -1.79
SHC1P29353 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.89□□□□□ -1.79
SHC1P29353 GAPDHP49-201ENST00000421421 961 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC115285.1-201ENST00000424879 736 ntBASIC3.89□□□□□ -1.79
SHC1P29353 DEFB130D-201ENST00000426866 237 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AL035246.1-201ENST00000433554 1255 ntBASIC3.89□□□□□ -1.79
SHC1P29353 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHC1P29353 MTCO2P20-201ENST00000437339 673 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.89□□□□□ -1.79
SHC1P29353 FABP5P3-201ENST00000437960 408 ntBASIC3.89□□□□□ -1.79
SHC1P29353 ELOCP8-201ENST00000439309 332 ntBASIC3.89□□□□□ -1.79
SHC1P29353 ARF4P4-201ENST00000439608 520 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC092473.1-201ENST00000441098 221 ntBASIC3.89□□□□□ -1.79
SHC1P29353 OR10R1P-201ENST00000441524 1141 ntBASIC3.89□□□□□ -1.79
SHC1P29353 ELOCP15-201ENST00000442090 332 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AL353898.1-201ENST00000444055 238 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AL591719.1-201ENST00000444669 744 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AL031313.1-201ENST00000448435 256 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC104306.1-201ENST00000449702 371 ntBASIC3.89□□□□□ -1.79
SHC1P29353 ABCF2P2-201ENST00000450549 296 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.89□□□□□ -1.79
SHC1P29353 RPL21P47-201ENST00000483696 477 ntBASIC3.89□□□□□ -1.79
SHC1P29353 MTCO3P35-201ENST00000485582 781 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC041039.1-201ENST00000485656 536 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.89□□□□□ -1.79
SHC1P29353 AC026979.1-201ENST00000492525 396 ntBASIC3.89□□□□□ -1.79
SHC1P29353 RN7SL812P-201ENST00000493791 279 ntBASIC3.89□□□□□ -1.79
SHC1P29353 RN7SL691P-201ENST00000494487 301 ntBASIC3.89□□□□□ -1.79
SHC1P29353 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.89□□□□□ -1.79
SHC1P29353 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.89□□□□□ -1.79
SHC1P29353 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.89□□□□□ -1.79
SHC1P29353 OR8K4P-201ENST00000534608 872 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.89□□□□□ -1.79
SHC1P29353 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.89□□□□□ -1.79
SHC1P29353 AC106734.1-201ENST00000568646 663 ntBASIC3.89□□□□□ -1.79
SHC1P29353 MIR4284-201ENST00000578924 81 ntBASIC3.89□□□□□ -1.79
SHC1P29353 KPNA2P3-201ENST00000584190 848 ntBASIC3.89□□□□□ -1.79
SHC1P29353 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms