Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC138761.3-201ENST00000579993 334 ntBASIC6.73□□□□□ -1.33
VARSP26640 RN7SL32P-201ENST00000580514 281 ntBASIC6.73□□□□□ -1.33
VARSP26640 RN7SL66P-201ENST00000582099 264 ntBASIC6.73□□□□□ -1.33
VARSP26640 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 Z82243.1-201ENST00000609432 473 ntBASIC6.73□□□□□ -1.33
VARSP26640 AC011890.2-201ENST00000613393 294 ntBASIC6.73□□□□□ -1.33
VARSP26640 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.73□□□□□ -1.33
VARSP26640 AL122023.1-201ENST00000622847 530 ntBASIC6.73□□□□□ -1.33
VARSP26640 AC092608.2-201ENST00000624427 218 ntBASIC6.73□□□□□ -1.33
VARSP26640 SNX18P12-201ENST00000624821 759 ntBASIC6.73□□□□□ -1.33
VARSP26640 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.73□□□□□ -1.33
VARSP26640 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
VARSP26640 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.73□□□□□ -1.33
VARSP26640 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.73□□□□□ -1.33
VARSP26640 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
VARSP26640 IMMTP1-201ENST00000435590 2219 ntBASIC6.73□□□□□ -1.33
VARSP26640 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.72□□□□□ -1.33
VARSP26640 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
VARSP26640 MTCO1P7-201ENST00000419523 1542 ntBASIC6.72□□□□□ -1.33
VARSP26640 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.72□□□□□ -1.33
VARSP26640 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 Y_RNA.117-201ENST00000363294 101 ntBASIC6.72□□□□□ -1.33
VARSP26640 MIR191-201ENST00000384873 92 ntBASIC6.72□□□□□ -1.33
VARSP26640 AL359715.1-201ENST00000404330 555 ntBASIC6.72□□□□□ -1.33
VARSP26640 RNU2-22P-201ENST00000411266 212 ntBASIC6.72□□□□□ -1.33
VARSP26640 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 AC048351.1-201ENST00000420064 602 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC093155.2-201ENST00000420734 937 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC092832.1-201ENST00000422934 400 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.72□□□□□ -1.33
VARSP26640 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 AL035551.1-201ENST00000446931 348 ntBASIC6.72□□□□□ -1.33
VARSP26640 AL445991.1-201ENST00000450381 475 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.72□□□□□ -1.33
VARSP26640 RNU7-182P-201ENST00000459009 62 ntBASIC6.72□□□□□ -1.33
VARSP26640 RPL7P6-201ENST00000480903 738 ntBASIC6.72□□□□□ -1.33
VARSP26640 RPL38P3-201ENST00000484463 213 ntBASIC6.72□□□□□ -1.33
VARSP26640 RPL23AP41-201ENST00000484754 458 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.72□□□□□ -1.33
VARSP26640 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.72□□□□□ -1.33
VARSP26640 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
VARSP26640 AC107952.1-201ENST00000524200 376 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.72□□□□□ -1.33
VARSP26640 AC018552.3-201ENST00000567416 561 ntBASIC6.72□□□□□ -1.33
VARSP26640 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 uc_338.34-201ENST00000617467 174 ntBASIC6.72□□□□□ -1.33
VARSP26640 AL732372.2-225ENST00000642124 456 ntBASIC6.72□□□□□ -1.33
VARSP26640 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 KPNA2P1-201ENST00000458289 1591 ntBASIC6.72□□□□□ -1.33
VARSP26640 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 TATDN2P3-201ENST00000452855 3665 ntBASIC6.72□□□□□ -1.33
VARSP26640 SAMMSON-210ENST00000641260 1308 ntBASIC6.72□□□□□ -1.33
VARSP26640 AL158163.1-201ENST00000603915 1649 ntBASIC6.72□□□□□ -1.33
VARSP26640 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
VARSP26640 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.72□□□□□ -1.33
VARSP26640 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
VARSP26640 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
VARSP26640 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
VARSP26640 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VARSP26640 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.71□□□□□ -1.33
VARSP26640 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
VARSP26640 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.33
VARSP26640 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VARSP26640 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
VARSP26640 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.71□□□□□ -1.33
VARSP26640 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
VARSP26640 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 AC003973.3-201ENST00000624863 2822 ntBASIC6.71□□□□□ -1.34
VARSP26640 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 CAP1P2-201ENST00000417455 1409 ntBASIC6.71□□□□□ -1.34
VARSP26640 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 Y_RNA.22-201ENST00000362492 102 ntBASIC6.71□□□□□ -1.34
VARSP26640 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 AL033519.1-201ENST00000407266 307 ntBASIC6.71□□□□□ -1.34
VARSP26640 RNU2-29P-201ENST00000410423 189 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms