Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.35□□□□□ -1.71
MSH3P20585 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.35□□□□□ -1.71
MSH3P20585 OR10V3P-201ENST00000525712 725 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.35□□□□□ -1.71
MSH3P20585 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 AC087897.1-201ENST00000550134 156 ntBASIC4.35□□□□□ -1.71
MSH3P20585 HMGB3P26-201ENST00000560051 582 ntBASIC4.35□□□□□ -1.71
MSH3P20585 NPM1P47-201ENST00000560843 856 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.35□□□□□ -1.71
MSH3P20585 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 AC022884.3-201ENST00000579571 248 ntBASIC4.35□□□□□ -1.71
MSH3P20585 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 AC079587.1-201ENST00000603846 277 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AL450336.1-201ENST00000605180 586 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AL356218.2-201ENST00000605264 187 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AC024060.1-201ENST00000607052 494 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AC009974.1-201ENST00000608881 455 ntBASIC4.35□□□□□ -1.71
MSH3P20585 MIR6748-201ENST00000610433 71 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AP003497.2-201ENST00000624220 967 ntBASIC4.35□□□□□ -1.71
MSH3P20585 MIR7641-1-201ENST00000627518 61 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AC097655.1-201ENST00000635075 318 ntBASIC4.35□□□□□ -1.71
MSH3P20585 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.35□□□□□ -1.71
MSH3P20585 OR6C71P-202ENST00000641886 1107 ntBASIC4.35□□□□□ -1.71
MSH3P20585 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 MTND4P26-201ENST00000415971 1359 ntBASIC4.35□□□□□ -1.71
MSH3P20585 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
MSH3P20585 GTF2H2B-203ENST00000508065 1432 ntBASIC4.35□□□□□ -1.71
MSH3P20585 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 AC090017.1-201ENST00000548612 1779 ntBASIC4.35□□□□□ -1.71
MSH3P20585 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.34□□□□□ -1.71
MSH3P20585 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MSH3P20585 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MSH3P20585 RNU6-543P-201ENST00000362576 108 ntBASIC4.34□□□□□ -1.71
MSH3P20585 RNU6-984P-201ENST00000363236 109 ntBASIC4.34□□□□□ -1.71
MSH3P20585 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 SNORA56-201ENST00000383966 129 ntBASIC4.34□□□□□ -1.71
MSH3P20585 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MSH3P20585 DNAJC19P6-201ENST00000401853 280 ntBASIC4.34□□□□□ -1.71
MSH3P20585 HSPD1P16-201ENST00000402302 394 ntBASIC4.34□□□□□ -1.71
MSH3P20585 RN7SKP167-201ENST00000411047 285 ntBASIC4.34□□□□□ -1.71
MSH3P20585 SSR1P2-201ENST00000415208 787 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AL449283.1-202ENST00000418249 604 ntBASIC4.34□□□□□ -1.71
MSH3P20585 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MSH3P20585 AC092447.3-201ENST00000426027 686 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AC073335.1-201ENST00000427776 363 ntBASIC4.34□□□□□ -1.71
MSH3P20585 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.34□□□□□ -1.71
MSH3P20585 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH3P20585 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH3P20585 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.34□□□□□ -1.71
MSH3P20585 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 AL050341.1-201ENST00000447743 313 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.34□□□□□ -1.71
MSH3P20585 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MSH3P20585 RNU7-27P-201ENST00000459281 62 ntBASIC4.34□□□□□ -1.71
MSH3P20585 RPL7P48-201ENST00000461513 746 ntBASIC4.34□□□□□ -1.71
MSH3P20585 APOOP2-201ENST00000461561 539 ntBASIC4.34□□□□□ -1.71
MSH3P20585 RN7SL98P-201ENST00000462271 300 ntBASIC4.34□□□□□ -1.71
MSH3P20585 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH3P20585 AC010627.1-201ENST00000503819 1294 ntBASIC4.34□□□□□ -1.71
MSH3P20585 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.34□□□□□ -1.71
MSH3P20585 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 PPBPP1-201ENST00000510807 373 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AC093840.1-201ENST00000511599 336 ntBASIC4.34□□□□□ -1.71
MSH3P20585 NDUFB4P12-201ENST00000513465 390 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH3P20585 MYL12AP1-201ENST00000518490 515 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.34□□□□□ -1.71
MSH3P20585 AC009643.1-201ENST00000532030 391 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH3P20585 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH3P20585 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.34□□□□□ -1.71
MSH3P20585 RPL23AP97-201ENST00000568955 471 ntBASIC4.34□□□□□ -1.71
MSH3P20585 MIR4277-201ENST00000578298 84 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.34□□□□□ -1.71
MSH3P20585 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.34□□□□□ -1.71
MSH3P20585 AC119501.1-201ENST00000603646 475 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AC113403.1-201ENST00000604910 193 ntBASIC4.34□□□□□ -1.71
MSH3P20585 AC010200.2-201ENST00000605098 235 ntBASIC4.34□□□□□ -1.71
MSH3P20585 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.34□□□□□ -1.71
MSH3P20585 PART1_2.1-201ENST00000612397 250 ntBASIC4.34□□□□□ -1.71
MSH3P20585 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
MSH3P20585 AL121873.1-201ENST00000616013 524 ntBASIC4.34□□□□□ -1.71
MSH3P20585 uc_338.13-201ENST00000618243 179 ntBASIC4.34□□□□□ -1.71
MSH3P20585 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.34□□□□□ -1.71
MSH3P20585 SEPT7P7-201ENST00000420492 1301 ntBASIC4.34□□□□□ -1.71
MSH3P20585 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MSH3P20585 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MSH3P20585 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms