Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC092435.3-201ENST00000565538 3654 ntBASIC6.09□□□□□ -1.44
TOP2AP11388 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TOP2AP11388 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
TOP2AP11388 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TOP2AP11388 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TOP2AP11388 BX842559.1-201ENST00000419615 532 ntBASIC6.08□□□□□ -1.44
TOP2AP11388 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.08□□□□□ -1.44
TOP2AP11388 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.08□□□□□ -1.44
TOP2AP11388 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
TOP2AP11388 AC084036.1-201ENST00000609190 508 ntBASIC6.08□□□□□ -1.44
TOP2AP11388 AC138627.1-204ENST00000641894 765 ntBASIC6.08□□□□□ -1.44
TOP2AP11388 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.08□□□□□ -1.44
TOP2AP11388 AC027290.2-201ENST00000623210 18662 ntBASIC6.08□□□□□ -1.44
TOP2AP11388 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.07□□□□□ -1.44
TOP2AP11388 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TOP2AP11388 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TOP2AP11388 AL078595.2-201ENST00000605309 1780 ntBASIC6.07□□□□□ -1.44
TOP2AP11388 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TOP2AP11388 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TOP2AP11388 Y_RNA.510-201ENST00000384511 114 ntBASIC6.07□□□□□ -1.44
TOP2AP11388 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TOP2AP11388 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TOP2AP11388 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.07□□□□□ -1.44
TOP2AP11388 RPL7P44-201ENST00000424827 742 ntBASIC6.07□□□□□ -1.44
TOP2AP11388 NPM1P17-201ENST00000479221 602 ntBASIC6.07□□□□□ -1.44
TOP2AP11388 RPL7P23-201ENST00000493874 747 ntBASIC6.07□□□□□ -1.44
TOP2AP11388 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC6.07□□□□□ -1.44
TOP2AP11388 AC092868.3-201ENST00000560515 784 ntBASIC6.07□□□□□ -1.44
TOP2AP11388 AC006539.2-201ENST00000601729 572 ntBASIC6.07□□□□□ -1.44
TOP2AP11388 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TOP2AP11388 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TOP2AP11388 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.07□□□□□ -1.44
TOP2AP11388 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
TOP2AP11388 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOP2AP11388 AC024341.1-201ENST00000526444 1552 ntBASIC6.06□□□□□ -1.44
TOP2AP11388 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOP2AP11388 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
TOP2AP11388 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.06□□□□□ -1.44
TOP2AP11388 AC097262.1-201ENST00000452559 548 ntBASIC6.06□□□□□ -1.44
TOP2AP11388 AP001992.1-205ENST00000462248 379 ntBASIC6.06□□□□□ -1.44
TOP2AP11388 AC020893.1-201ENST00000502452 580 ntBASIC6.06□□□□□ -1.44
TOP2AP11388 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.06□□□□□ -1.44
TOP2AP11388 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.06□□□□□ -1.44
TOP2AP11388 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.06□□□□□ -1.44
TOP2AP11388 AC008638.3-201ENST00000603341 463 ntBASIC6.06□□□□□ -1.44
TOP2AP11388 AL732372.2-225ENST00000642124 456 ntBASIC6.06□□□□□ -1.44
TOP2AP11388 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC6.06□□□□□ -1.44
TOP2AP11388 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TOP2AP11388 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOP2AP11388 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOP2AP11388 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TOP2AP11388 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOP2AP11388 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.06□□□□□ -1.44
TOP2AP11388 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TOP2AP11388 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC6.05□□□□□ -1.44
TOP2AP11388 Z95331.1-201ENST00000623075 23112 ntBASIC6.05□□□□□ -1.44
TOP2AP11388 Z83843.1-201ENST00000604070 3685 ntBASIC6.05□□□□□ -1.44
TOP2AP11388 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.05□□□□□ -1.44
TOP2AP11388 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.05□□□□□ -1.44
TOP2AP11388 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.05□□□□□ -1.44
TOP2AP11388 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.05□□□□□ -1.44
TOP2AP11388 BX119904.1-201ENST00000432026 348 ntBASIC6.05□□□□□ -1.44
TOP2AP11388 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.05□□□□□ -1.44
TOP2AP11388 NANOGNBP1-201ENST00000448444 480 ntBASIC6.05□□□□□ -1.44
TOP2AP11388 AC112198.1-201ENST00000505369 1220 ntBASIC6.05□□□□□ -1.44
TOP2AP11388 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TOP2AP11388 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC6.05□□□□□ -1.44
TOP2AP11388 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.05□□□□□ -1.44
TOP2AP11388 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
TOP2AP11388 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TOP2AP11388 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TOP2AP11388 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.05□□□□□ -1.44
TOP2AP11388 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TOP2AP11388 RPS20P1-201ENST00000434853 354 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.04□□□□□ -1.44
TOP2AP11388 AC023598.1-201ENST00000472521 361 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 UBE2DNL-203ENST00000474922 222 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.04□□□□□ -1.44
TOP2AP11388 MIR4672-201ENST00000583126 81 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.04□□□□□ -1.44
TOP2AP11388 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TOP2AP11388 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.04□□□□□ -1.44
TOP2AP11388 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.04□□□□□ -1.44
TOP2AP11388 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TOP2AP11388 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.04□□□□□ -1.44
TOP2AP11388 AL031121.1-201ENST00000406553 254 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 AC236972.1-201ENST00000433225 199 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 AL353705.1-201ENST00000433468 480 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 HMGB3P22-202ENST00000451823 572 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 RPL27AP5-201ENST00000469428 449 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 AC024224.1-201ENST00000538284 609 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 AL121766.1-201ENST00000547436 487 ntBASIC6.04□□□□□ -1.44
TOP2AP11388 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.04□□□□□ -1.44
TOP2AP11388 NMD3P1-201ENST00000439704 1488 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 FAM35BP-202ENST00000497389 3337 ntBASIC6.03□□□□□ -1.44
TOP2AP11388 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC6.03□□□□□ -1.44
TOP2AP11388 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP2AP11388 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
TOP2AP11388 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOP2AP11388 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms