Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC108120.2-201ENST00000512973 294 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 MTCO1P35-201ENST00000515270 228 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.7□□□□□ -1.5
SNRPA1P09661 HMGB1P1-201ENST00000522557 636 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AC138832.1-201ENST00000522871 556 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 AP003461.1-201ENST00000528866 78 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 CYP2C60P-201ENST00000566088 139 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AC080013.3-201ENST00000606839 578 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SNRPA1P09661 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 AC006971.1-201ENST00000407916 4486 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AC139769.1-204ENST00000472297 1931 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SNRPA1P09661 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.69□□□□□ -1.5
SNRPA1P09661 MTND4P5-201ENST00000435821 1374 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 Y_RNA.126-201ENST00000363382 111 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 RNU1-87P-201ENST00000363727 170 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 RNU6-353P-201ENST00000364266 108 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.69□□□□□ -1.5
SNRPA1P09661 BMS1P3-201ENST00000372011 932 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNRPA1P09661 RNU6-1263P-201ENST00000384601 106 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 OR4K6P-201ENST00000416478 897 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 MTND1P20-201ENST00000430341 950 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC073387.1-201ENST00000453261 709 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 FABP5P12-201ENST00000515543 389 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 RNA5SP497-201ENST00000516081 97 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 MTCO3P15-201ENST00000526563 574 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 OR5AK3P-201ENST00000527486 1297 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 PDCL2P2-201ENST00000533651 189 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.69□□□□□ -1.5
SNRPA1P09661 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AL359219.2-201ENST00000555184 348 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.69□□□□□ -1.5
SNRPA1P09661 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AC119751.7-201ENST00000600494 245 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AC090181.2-201ENST00000602975 672 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AC067959.1-201ENST00000604334 379 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AL450489.1-201ENST00000612071 468 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AC139769.3-201ENST00000618383 175 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.69□□□□□ -1.5
SNRPA1P09661 AP003497.2-201ENST00000624220 967 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 ZNF663P-202ENST00000641770 1131 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNRPA1P09661 ELL2P3-201ENST00000457883 1602 ntBASIC5.69□□□□□ -1.5
SNRPA1P09661 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNRPA1P09661 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.69□□□□□ -1.5
SNRPA1P09661 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SNRPA1P09661 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.68□□□□□ -1.5
SNRPA1P09661 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.68□□□□□ -1.5
SNRPA1P09661 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNRPA1P09661 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 RNA5SP28-201ENST00000363841 119 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNRPA1P09661 MT-TP-201ENST00000387461 68 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 EI24P3-201ENST00000399046 1062 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.68□□□□□ -1.5
SNRPA1P09661 Z75741.2-201ENST00000417272 1167 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNRPA1P09661 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 COX7BP2-201ENST00000437976 242 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AC114495.1-201ENST00000441274 436 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.68□□□□□ -1.5
SNRPA1P09661 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.68□□□□□ -1.5
SNRPA1P09661 AL035407.2-201ENST00000454090 378 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms