Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 HSPE1P8-201ENST00000406997 288 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 MIR1303-201ENST00000408625 86 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 USP9YP19-201ENST00000412165 485 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 RPL7P29-201ENST00000437151 728 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 MTND2P30-201ENST00000456663 382 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 NPM1P17-201ENST00000479221 602 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 RPS29P19-201ENST00000479709 171 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC104687.1-201ENST00000485829 412 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC023050.1-201ENST00000498198 304 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC010374.1-201ENST00000503762 1237 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC111193.1-201ENST00000504097 155 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 COL6A4P2-205ENST00000509855 506 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC025768.1-201ENST00000510057 267 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 SNORD116-26-201ENST00000516006 96 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 RN7SKP83-201ENST00000516512 178 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 IGKV1-32-201ENST00000519290 311 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 OR8K2P-201ENST00000524645 927 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC010857.1-201ENST00000606398 594 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AP001033.2-201ENST00000609701 1003 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC091948.2-201ENST00000636510 279 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 MIR7153-201ENST00000637758 57 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 MTND4P31-201ENST00000425607 1343 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 XIAPP3-201ENST00000312918 795 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RNA5SP87-201ENST00000384155 118 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RNU6-796P-201ENST00000391086 107 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 HLFP1-201ENST00000402375 499 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RPL37P18-201ENST00000411602 243 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 VTA1P1-201ENST00000414044 866 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC069213.2-201ENST00000420238 366 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC073508.1-201ENST00000428866 656 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC023141.6-201ENST00000429418 337 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 ELOCP3-201ENST00000439303 348 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RPS27P5-201ENST00000444247 244 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RPL23AP81-201ENST00000455252 467 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RPL21P71-201ENST00000465598 459 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RPL7L1P8-201ENST00000469911 741 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AL161747.1-201ENST00000480068 358 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 RPL30P11-201ENST00000495304 339 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC105233.1-201ENST00000498840 781 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC010468.3-201ENST00000508225 458 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AP001781.1-201ENST00000530977 207 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC069061.3-201ENST00000582254 823 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 MIR4512-201ENST00000583257 77 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC022146.1-201ENST00000595307 847 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 ZNF92P2-201ENST00000600543 1059 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC069304.3-201ENST00000603938 1084 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC010680.3-201ENST00000604215 520 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AL133243.1-201ENST00000614487 366 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC073592.7-201ENST00000623659 507 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 U6.107-201ENST00000637108 79 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms