Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CYB5AP5-201ENST00000549779 389 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.13□□□□□ -1.59
MBD4O95243 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.13□□□□□ -1.59
MBD4O95243 BNIP3P27-201ENST00000599991 412 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AC124016.2-201ENST00000610058 665 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AC022079.2-201ENST00000619739 566 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AL023881.1-201ENST00000621088 301 ntBASIC5.13□□□□□ -1.59
MBD4O95243 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AL049777.1-201ENST00000622740 518 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.13□□□□□ -1.59
MBD4O95243 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MBD4O95243 MAPK10-320ENST00000641462 6696 ntBASIC5.13□□□□□ -1.59
MBD4O95243 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
MBD4O95243 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
MBD4O95243 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.13□□□□□ -1.59
MBD4O95243 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.13□□□□□ -1.59
MBD4O95243 NEAT1-202ENST00000501122 22743 ntBASIC5.12□□□□□ -1.59
MBD4O95243 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.12□□□□□ -1.59
MBD4O95243 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 AL121657.1-201ENST00000327215 531 ntBASIC5.12□□□□□ -1.59
MBD4O95243 RNU5B-1-201ENST00000363286 116 ntBASIC5.12□□□□□ -1.59
MBD4O95243 RNA5SP22-201ENST00000365393 109 ntBASIC5.12□□□□□ -1.59
MBD4O95243 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
MBD4O95243 RNU6-1176P-201ENST00000390955 107 ntBASIC5.12□□□□□ -1.59
MBD4O95243 RN7SKP199-201ENST00000410325 305 ntBASIC5.12□□□□□ -1.59
MBD4O95243 RPL37P1-201ENST00000432310 284 ntBASIC5.12□□□□□ -1.59
MBD4O95243 BTF3P10-201ENST00000433415 495 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.12□□□□□ -1.59
MBD4O95243 SDR42E1P3-201ENST00000438345 502 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AC105402.2-201ENST00000438503 358 ntBASIC5.12□□□□□ -1.59
MBD4O95243 ARF4P4-201ENST00000439608 520 ntBASIC5.12□□□□□ -1.59
MBD4O95243 HMGB3P9-201ENST00000441799 583 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AL592437.1-201ENST00000443781 492 ntBASIC5.12□□□□□ -1.59
MBD4O95243 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.12□□□□□ -1.59
MBD4O95243 RPL7P31-201ENST00000450192 724 ntBASIC5.12□□□□□ -1.59
MBD4O95243 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.12□□□□□ -1.59
MBD4O95243 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.12□□□□□ -1.59
MBD4O95243 AC015724.1-201ENST00000478577 156 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AC093267.1-201ENST00000489176 961 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AC093801.2-201ENST00000503966 1050 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.12□□□□□ -1.59
MBD4O95243 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 AL592156.1-201ENST00000508758 304 ntBASIC5.12□□□□□ -1.59
MBD4O95243 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.12□□□□□ -1.59
MBD4O95243 RN7SKP96-201ENST00000516948 297 ntBASIC5.12□□□□□ -1.59
MBD4O95243 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.12□□□□□ -1.59
MBD4O95243 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.12□□□□□ -1.59
MBD4O95243 IGJP1-201ENST00000522682 475 ntBASIC5.12□□□□□ -1.59
MBD4O95243 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.12□□□□□ -1.59
MBD4O95243 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.12□□□□□ -1.59
MBD4O95243 AL109766.1-201ENST00000555080 552 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AC025884.1-201ENST00000556034 378 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.12□□□□□ -1.59
MBD4O95243 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
MBD4O95243 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.12□□□□□ -1.59
MBD4O95243 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
MBD4O95243 VN1R87P-201ENST00000596706 487 ntBASIC5.12□□□□□ -1.59
MBD4O95243 FAM27D1-201ENST00000612308 341 ntBASIC5.12□□□□□ -1.59
MBD4O95243 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
MBD4O95243 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.12□□□□□ -1.59
MBD4O95243 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 AC010300.1-201ENST00000600671 5134 ntBASIC5.12□□□□□ -1.59
MBD4O95243 AL139811.1-201ENST00000424779 2299 ntBASIC5.12□□□□□ -1.59
MBD4O95243 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.12□□□□□ -1.59
MBD4O95243 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
MBD4O95243 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MBD4O95243 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MBD4O95243 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
MBD4O95243 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
MBD4O95243 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.11□□□□□ -1.59
MBD4O95243 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.11□□□□□ -1.59
MBD4O95243 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MBD4O95243 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MBD4O95243 AL355143.1-201ENST00000407101 841 ntBASIC5.11□□□□□ -1.59
MBD4O95243 PRELID3BP11-201ENST00000414230 479 ntBASIC5.11□□□□□ -1.59
MBD4O95243 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.11□□□□□ -1.59
MBD4O95243 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.11□□□□□ -1.59
MBD4O95243 AL132765.1-201ENST00000434165 553 ntBASIC5.11□□□□□ -1.59
MBD4O95243 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MBD4O95243 RNF2P1-201ENST00000442955 1010 ntBASIC5.11□□□□□ -1.59
MBD4O95243 AC233982.1-201ENST00000451247 436 ntBASIC5.11□□□□□ -1.59
MBD4O95243 NUTF2P7-201ENST00000453086 375 ntBASIC5.11□□□□□ -1.59
MBD4O95243 RPL23AP81-201ENST00000455252 467 ntBASIC5.11□□□□□ -1.59
MBD4O95243 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.11□□□□□ -1.59
MBD4O95243 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
MBD4O95243 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.11□□□□□ -1.59
MBD4O95243 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.11□□□□□ -1.59
MBD4O95243 RN7SKP82-201ENST00000516786 223 ntBASIC5.11□□□□□ -1.59
MBD4O95243 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.11□□□□□ -1.59
MBD4O95243 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.11□□□□□ -1.59
MBD4O95243 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.11□□□□□ -1.59
MBD4O95243 AC006064.5-201ENST00000541782 248 ntBASIC5.11□□□□□ -1.59
MBD4O95243 PDCD5P1-201ENST00000543528 309 ntBASIC5.11□□□□□ -1.59
MBD4O95243 RPL21P7-201ENST00000557463 483 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms