Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF40O75150 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RNF40O75150 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.32□□□□□ -1.24
RNF40O75150 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF40O75150 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 Y_RNA.461-201ENST00000384263 103 ntBASIC7.32□□□□□ -1.24
RNF40O75150 RNU2-29P-201ENST00000410423 189 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AC017035.1-201ENST00000411999 1115 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AL591848.1-201ENST00000413092 322 ntBASIC7.32□□□□□ -1.24
RNF40O75150 OR6C66P-201ENST00000414917 930 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AC048351.1-201ENST00000420064 602 ntBASIC7.32□□□□□ -1.24
RNF40O75150 RPL24P2-201ENST00000421023 475 ntBASIC7.32□□□□□ -1.24
RNF40O75150 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF40O75150 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF40O75150 RPL23AP4-201ENST00000427757 463 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AL121916.1-201ENST00000429405 308 ntBASIC7.32□□□□□ -1.24
RNF40O75150 RPL3P11-201ENST00000434028 1146 ntBASIC7.32□□□□□ -1.24
RNF40O75150 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF40O75150 AC083855.1-201ENST00000440041 258 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AC104332.1-201ENST00000440471 797 ntBASIC7.32□□□□□ -1.24
RNF40O75150 DYNLT3P2-201ENST00000442517 295 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AL121871.1-201ENST00000443413 436 ntBASIC7.32□□□□□ -1.24
RNF40O75150 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 DCAF13P2-201ENST00000514188 555 ntBASIC7.32□□□□□ -1.24
RNF40O75150 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF40O75150 RNU6-1016P-201ENST00000516689 94 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF40O75150 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF40O75150 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF40O75150 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF40O75150 PPIAP6-201ENST00000557078 499 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF40O75150 AC125232.2-201ENST00000592457 143 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 AC010201.1-201ENST00000605051 540 ntBASIC7.32□□□□□ -1.24
RNF40O75150 uc_338.34-201ENST00000617467 174 ntBASIC7.32□□□□□ -1.24
RNF40O75150 AC131009.3-201ENST00000621809 287 ntBASIC7.32□□□□□ -1.24
RNF40O75150 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF40O75150 AC011504.1-201ENST00000623331 4103 ntBASIC7.32□□□□□ -1.24
RNF40O75150 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF40O75150 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 AL512329.1-201ENST00000404600 1592 ntBASIC7.32□□□□□ -1.24
RNF40O75150 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF40O75150 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF40O75150 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF40O75150 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 CCDC150P1-201ENST00000537123 2215 ntBASIC7.31□□□□□ -1.24
RNF40O75150 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 TNPO1P2-201ENST00000426249 2665 ntBASIC7.31□□□□□ -1.24
RNF40O75150 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 RPL24P4-201ENST00000326586 421 ntBASIC7.31□□□□□ -1.24
RNF40O75150 Y_RNA.106-201ENST00000363189 100 ntBASIC7.31□□□□□ -1.24
RNF40O75150 Y_RNA.380-201ENST00000365663 111 ntBASIC7.31□□□□□ -1.24
RNF40O75150 MIR152-201ENST00000385212 87 ntBASIC7.31□□□□□ -1.24
RNF40O75150 MT-TW-201ENST00000387382 68 ntBASIC7.31□□□□□ -1.24
RNF40O75150 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RNF40O75150 AL391419.1-201ENST00000398901 1275 ntBASIC7.31□□□□□ -1.24
RNF40O75150 RPL21P1-201ENST00000399532 476 ntBASIC7.31□□□□□ -1.24
RNF40O75150 MIR541-201ENST00000401360 84 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AL136131.1-201ENST00000406079 803 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF40O75150 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.31□□□□□ -1.24
RNF40O75150 AL137014.1-201ENST00000420490 1226 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AL139184.1-202ENST00000422303 222 ntBASIC7.31□□□□□ -1.24
RNF40O75150 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF40O75150 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF40O75150 MTND5P15-201ENST00000434246 349 ntBASIC7.31□□□□□ -1.24
RNF40O75150 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF40O75150 AC092013.1-201ENST00000438795 332 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF40O75150 RPL36AP15-201ENST00000444514 266 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF40O75150 OSTCP8-201ENST00000445117 448 ntBASIC7.31□□□□□ -1.24
RNF40O75150 NANOGP10-201ENST00000453325 895 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AL117692.1-201ENST00000494283 713 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AC009567.2-201ENST00000502989 349 ntBASIC7.31□□□□□ -1.24
RNF40O75150 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 AC131281.1-201ENST00000522984 164 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.31□□□□□ -1.24
RNF40O75150 AP000763.2-201ENST00000540641 163 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC7.31□□□□□ -1.24
RNF40O75150 AC092718.4-201ENST00000566639 716 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms