Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC026333.2-201ENST00000542164 106 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SSSCA1O60232 AC004024.1-201ENST00000549244 247 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AL389895.1-201ENST00000554127 252 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.89□□□□□ -1.95
SSSCA1O60232 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.89□□□□□ -1.95
SSSCA1O60232 AC008507.1-201ENST00000587506 734 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AC013244.1-201ENST00000604279 193 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.89□□□□□ -1.95
SSSCA1O60232 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AC116447.1-201ENST00000613153 453 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
SSSCA1O60232 AL445567.2-201ENST00000618935 498 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.89□□□□□ -1.95
SSSCA1O60232 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSSCA1O60232 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.89□□□□□ -1.95
SSSCA1O60232 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
SSSCA1O60232 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.88□□□□□ -1.95
SSSCA1O60232 AC007496.3-201ENST00000624987 3443 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SSSCA1O60232 AC022893.2-201ENST00000564832 3296 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSSCA1O60232 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSSCA1O60232 EI24P2-201ENST00000397776 1076 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
SSSCA1O60232 SKINT1L-201ENST00000401057 817 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.88□□□□□ -1.95
SSSCA1O60232 RANP4-201ENST00000413361 655 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.88□□□□□ -1.95
SSSCA1O60232 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.88□□□□□ -1.95
SSSCA1O60232 AC009480.2-201ENST00000422916 432 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AL138787.1-202ENST00000437804 898 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.88□□□□□ -1.95
SSSCA1O60232 NUTF2P3-201ENST00000448540 384 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 RPL7AP52-201ENST00000458096 790 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 PPIAP21-201ENST00000464473 501 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AL049830.2-201ENST00000480072 201 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 TRAV31-201ENST00000502780 342 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AC021146.5-201ENST00000503544 545 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 SNORA31.9-201ENST00000516429 84 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 SNORA70.19-201ENST00000516717 90 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AC107934.2-201ENST00000518653 310 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.88□□□□□ -1.95
SSSCA1O60232 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.88□□□□□ -1.95
SSSCA1O60232 AC137768.1-201ENST00000549998 553 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.88□□□□□ -1.95
SSSCA1O60232 MIR3138-201ENST00000585238 82 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.88□□□□□ -1.95
SSSCA1O60232 AP000346.3-201ENST00000622821 210 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AC110801.1-201ENST00000623590 212 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 AC090506.2-201ENST00000624521 419 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSSCA1O60232 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.88□□□□□ -1.95
SSSCA1O60232 CFTRP2-201ENST00000634304 199 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 U6.98-201ENST00000637157 84 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.88□□□□□ -1.95
SSSCA1O60232 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSSCA1O60232 AC024560.2-201ENST00000507981 1497 ntBASIC2.88□□□□□ -1.95
SSSCA1O60232 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSSCA1O60232 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.87□□□□□ -1.95
SSSCA1O60232 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SSSCA1O60232 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.87□□□□□ -1.95
SSSCA1O60232 OR6C69P-201ENST00000394268 893 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AL133270.1-201ENST00000402635 279 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 RNA5SP31-201ENST00000411144 127 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.87□□□□□ -1.95
SSSCA1O60232 AC093578.1-201ENST00000415219 368 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AC245291.1-201ENST00000419501 328 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AL592293.2-201ENST00000422292 996 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AL049610.1-201ENST00000423374 372 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSSCA1O60232 RPL23AP82-202ENST00000427528 469 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AC105402.2-201ENST00000438503 358 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 ELOCP10-201ENST00000440624 327 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 HMGB3P8-201ENST00000449709 577 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.87□□□□□ -1.95
SSSCA1O60232 RPL12P26-201ENST00000452430 487 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 CENPBD1P1-201ENST00000464061 469 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.87□□□□□ -1.95
SSSCA1O60232 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.87□□□□□ -1.95
SSSCA1O60232 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.87□□□□□ -1.95
SSSCA1O60232 MRPL49P2-201ENST00000521066 465 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC2.87□□□□□ -1.95
SSSCA1O60232 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.87□□□□□ -1.95
SSSCA1O60232 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.87□□□□□ -1.95
SSSCA1O60232 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.87□□□□□ -1.95
SSSCA1O60232 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.87□□□□□ -1.95
SSSCA1O60232 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.87□□□□□ -1.95
SSSCA1O60232 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.87□□□□□ -1.95
SSSCA1O60232 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.87□□□□□ -1.95
SSSCA1O60232 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.87□□□□□ -1.95
SSSCA1O60232 SNORD39.2-201ENST00000579995 76 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 ELOCP34-201ENST00000604436 327 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AL034374.2-201ENST00000605281 548 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AC024940.4-201ENST00000605507 246 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AC116651.1-201ENST00000609724 556 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 AP000894.4-201ENST00000610185 483 ntBASIC2.87□□□□□ -1.95
SSSCA1O60232 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC2.87□□□□□ -1.95
SSSCA1O60232 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.87□□□□□ -1.95
SSSCA1O60232 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms