Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.11□□□□□ -1.75
RIPK2O43353 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.11□□□□□ -1.75
RIPK2O43353 RPS26P40-201ENST00000435209 294 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 RPL12P3-201ENST00000440080 396 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RIPK2O43353 RPL23AP33-201ENST00000442301 452 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.11□□□□□ -1.75
RIPK2O43353 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.11□□□□□ -1.75
RIPK2O43353 RNU6-775P-201ENST00000459318 96 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 RPL35P6-201ENST00000490024 372 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AC078918.1-201ENST00000498515 228 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 OR5M14P-201ENST00000506803 618 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 AC005798.1-201ENST00000513715 387 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 RNU6-751P-201ENST00000516382 101 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 RNU2-58P-201ENST00000516403 183 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.11□□□□□ -1.75
RIPK2O43353 MTND2P26-201ENST00000528255 1029 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 MIR4270-201ENST00000581799 70 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.11□□□□□ -1.75
RIPK2O43353 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.11□□□□□ -1.75
RIPK2O43353 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
RIPK2O43353 AC119744.1-201ENST00000454746 1715 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIPK2O43353 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIPK2O43353 CR788268.1-201ENST00000603931 1809 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.11□□□□□ -1.75
RIPK2O43353 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
RIPK2O43353 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RIPK2O43353 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.11□□□□□ -1.75
RIPK2O43353 AC066616.2-201ENST00000559334 1481 ntBASIC4.11□□□□□ -1.75
RIPK2O43353 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RIPK2O43353 AL133383.2-201ENST00000622958 2336 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
RIPK2O43353 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIPK2O43353 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RIPK2O43353 AC083799.1-201ENST00000366451 910 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 MIR323B-201ENST00000385269 82 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 TAF9BP2-201ENST00000400856 499 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 RN7SKP229-201ENST00000410465 302 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 XKRYP4-201ENST00000414395 483 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AC241520.1-201ENST00000422654 1099 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 ZNF965P-201ENST00000432501 817 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AL627308.1-201ENST00000435693 821 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AC114878.1-201ENST00000441166 358 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 XKRY2-201ENST00000442362 1093 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 XKRYP5-201ENST00000449659 483 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 BX276092.4-201ENST00000452056 248 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.1□□□□□ -1.75
RIPK2O43353 RPL7P32-201ENST00000457119 744 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 RNA5SP246-201ENST00000458909 119 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 RPL9P32-201ENST00000464118 620 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AC068305.1-201ENST00000497406 726 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AC105233.1-201ENST00000498840 781 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.1□□□□□ -1.75
RIPK2O43353 KCTD9P2-201ENST00000512203 1013 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.1□□□□□ -1.75
RIPK2O43353 RN7SKP96-201ENST00000516948 297 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.1□□□□□ -1.75
RIPK2O43353 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RIPK2O43353 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC090312.2-201ENST00000582687 378 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 EIF1P6-201ENST00000600054 334 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC090948.1-201ENST00000607464 549 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AC018754.1-201ENST00000607486 925 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.1□□□□□ -1.75
RIPK2O43353 AC018445.2-201ENST00000622987 260 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.1□□□□□ -1.75
RIPK2O43353 SAGE4P-201ENST00000442271 3381 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AC015813.6-201ENST00000624409 5808 ntBASIC4.1□□□□□ -1.75
RIPK2O43353 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIPK2O43353 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RIPK2O43353 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
RIPK2O43353 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RIPK2O43353 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RIPK2O43353 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.09□□□□□ -1.75
RIPK2O43353 SNORA31-201ENST00000362607 130 ntBASIC4.09□□□□□ -1.75
RIPK2O43353 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RIPK2O43353 RNU6-1293P-201ENST00000384077 107 ntBASIC4.09□□□□□ -1.75
RIPK2O43353 MIR129-1-201ENST00000384972 72 ntBASIC4.09□□□□□ -1.75
RIPK2O43353 BTBD10P2-201ENST00000404779 676 ntBASIC4.09□□□□□ -1.75
RIPK2O43353 MIR1251-201ENST00000408552 70 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms