Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1AO00322 PPIAP31-201ENST00000405422 495 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 RAB28P1-201ENST00000411517 641 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1AO00322 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1AO00322 AC007064.3-201ENST00000422608 359 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1AO00322 AC004975.1-201ENST00000428733 208 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 FTH1P6-201ENST00000430768 320 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1AO00322 MTCYBP29-201ENST00000436327 1006 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1AO00322 NUTF2P7-201ENST00000453086 375 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 CYCSP53-201ENST00000455540 265 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 OR9M1P-201ENST00000459641 921 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1AO00322 AC108941.1-201ENST00000502853 530 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 AC010460.1-201ENST00000507087 466 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 PCBP2P3-201ENST00000509726 843 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 AC095050.2-201ENST00000510748 1458 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 RAC1P2-201ENST00000511164 579 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1AO00322 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.57□□□□□ -1.84
UPK1AO00322 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1AO00322 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1AO00322 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.57□□□□□ -1.84
UPK1AO00322 AC092079.1-201ENST00000558620 1985 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 AC068714.1-201ENST00000559623 800 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.57□□□□□ -1.84
UPK1AO00322 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.57□□□□□ -1.84
UPK1AO00322 AC017076.1-201ENST00000607613 578 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.57□□□□□ -1.84
UPK1AO00322 AC079684.1-201ENST00000621405 437 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
UPK1AO00322 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPK1AO00322 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
UPK1AO00322 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.56□□□□□ -1.84
UPK1AO00322 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 U1.1-201ENST00000384101 164 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
UPK1AO00322 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.56□□□□□ -1.84
UPK1AO00322 ZNF602P-201ENST00000405929 924 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 RNA5SP239-201ENST00000410218 129 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AJ239321.1-201ENST00000424255 564 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AL158073.1-201ENST00000426848 1104 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.56□□□□□ -1.84
UPK1AO00322 RPL12P46-201ENST00000436610 195 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1AO00322 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPK1AO00322 SNORA71B-202ENST00000439232 272 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 ELOCP10-201ENST00000440624 327 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1AO00322 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1AO00322 RPL21P71-201ENST00000465598 459 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 METTL15P1-201ENST00000481421 1045 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
UPK1AO00322 AC147055.1-201ENST00000509261 750 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.56□□□□□ -1.84
UPK1AO00322 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK1AO00322 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1AO00322 RNA5SP208-201ENST00000516156 78 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 RNU6-352P-201ENST00000516908 107 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1AO00322 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.56□□□□□ -1.84
UPK1AO00322 OR8R1P-201ENST00000543943 764 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC084033.1-201ENST00000550830 633 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK1AO00322 AC009303.3-201ENST00000591103 736 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC005255.1-201ENST00000593748 216 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.56□□□□□ -1.84
UPK1AO00322 ELOCP34-201ENST00000604436 327 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC090948.2-201ENST00000607363 564 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AC116447.1-201ENST00000613153 453 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 MIR6875-201ENST00000617506 72 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 AP001486.2-201ENST00000561652 5113 ntBASIC3.56□□□□□ -1.84
UPK1AO00322 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPK1AO00322 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPK1AO00322 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.55□□□□□ -1.84
UPK1AO00322 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.55□□□□□ -1.84
UPK1AO00322 AC009229.4-201ENST00000623854 1947 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UPK1AO00322 RNU6-628P-201ENST00000410675 107 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 RNU6-603P-201ENST00000411403 107 ntBASIC3.55□□□□□ -1.84
UPK1AO00322 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.55□□□□□ -1.84
UPK1AO00322 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.55□□□□□ -1.84
UPK1AO00322 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms