Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 U3.25-201ENST00000391209 220 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 OR3A2-201ENST00000408891 1076 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 RPS27AP14-201ENST00000422868 454 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AL136231.1-201ENST00000429407 730 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC105399.1-202ENST00000447303 205 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 RN7SL809P-201ENST00000482040 297 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC025674.1-201ENST00000507074 324 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC091912.1-201ENST00000511351 248 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 MTND6P2-201ENST00000512226 524 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 RNA5SP362-201ENST00000516048 118 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 DEFB108A-201ENST00000530110 222 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC084757.1-201ENST00000559987 490 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC091488.1-201ENST00000604239 660 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC112187.2-201ENST00000604345 283 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 MIR6768-201ENST00000610734 72 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 uc_338.7-201ENST00000621834 124 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 MTND5P26-201ENST00000426018 1752 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC144833.1-201ENST00000567953 4089 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 AC079097.1-201ENST00000512187 1399 ntBASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.64□□□□□ -1.51
PPARGC1AQ9UBK2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 RNY4P24-201ENST00000362735 96 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 RNU5F-6P-201ENST00000362979 116 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 RNU5E-4P-201ENST00000364931 120 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC092642.1-201ENST00000392417 425 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 MIR548F1-201ENST00000408667 84 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 RNU2-65P-201ENST00000410162 185 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AL136133.1-201ENST00000413694 376 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC083875.1-201ENST00000419509 405 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC233981.1-201ENST00000423224 461 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 USP9YP18-201ENST00000425912 695 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 BMS1P19-201ENST00000433925 393 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AL596276.1-201ENST00000434465 418 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC073465.2-201ENST00000440938 498 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 EEF1E1P1-201ENST00000446998 430 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 RPL7P31-201ENST00000450192 724 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AL359385.1-201ENST00000456509 365 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 RNU6-583P-201ENST00000516012 92 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 RN7SKP99-201ENST00000517028 307 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 ARL2BPP5-201ENST00000523141 481 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AL359219.2-201ENST00000555184 348 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 CYCSP2-201ENST00000558168 301 ntBASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
PPARGC1AQ9UBK2 SNORA59B-202ENST00000578183 701 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms