Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RN7SL459P-201ENST00000481078 302 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC106872.2-201ENST00000494303 480 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 SNX5P1-201ENST00000505757 1041 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 Vault.1-201ENST00000516474 102 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 RNU6-889P-201ENST00000517189 103 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC010476.1-201ENST00000519111 851 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 MIR4277-201ENST00000578298 84 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 PCNAP1-202ENST00000595299 752 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AL354984.3-201ENST00000604803 325 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AL049634.3-201ENST00000604968 457 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC245389.2-201ENST00000616023 576 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC243756.2-201ENST00000618406 463 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC242843.1-201ENST00000618702 573 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC010435.1-201ENST00000623353 1177 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 EIF2AP4-201ENST00000424793 1781 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 MTND4P31-201ENST00000425607 1343 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AL353746.1-201ENST00000566293 6881 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 OR4K17-201ENST00000315543 1032 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 ELOCP19-201ENST00000411919 318 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC010385.1-201ENST00000412374 256 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01881-201ENST00000416103 412 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AL139095.3-201ENST00000419672 1203 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 RPS27AP7-201ENST00000422792 455 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 RPS3AP54-201ENST00000435535 734 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 MTCO3P16-201ENST00000454456 754 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 DNAJC19P1-201ENST00000455312 319 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC011276.1-201ENST00000469688 323 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC004069.2-201ENST00000505438 1114 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC108157.1-201ENST00000510511 539 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 RNU6-551P-201ENST00000516661 103 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC009643.1-201ENST00000532030 391 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 MIR5096-201ENST00000583713 70 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC242628.1-201ENST00000606810 391 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 AC008013.2-202ENST00000637965 364 ntBASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCNB1IP1Q9NPC3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 DCAF13P1-201ENST00000495256 1330 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 AL158163.1-201ENST00000603915 1649 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 ERCC6-202ENST00000374127 1782 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 RNA5SP509-201ENST00000364577 119 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 RNA5SP36-201ENST00000410197 133 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 ELOCP6-201ENST00000429066 328 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 AC105402.2-201ENST00000438503 358 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 FABP3P2-201ENST00000453169 399 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 RPL37P3-201ENST00000456825 293 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 ELOCP12-201ENST00000458706 328 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 RPL35P6-201ENST00000490024 372 ntBASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.74□□□□□ -1.81
CCNB1IP1Q9NPC3 AC026726.1-201ENST00000512859 601 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms