Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AF246928.1-201ENST00000623768 87 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 CR381572.2-201ENST00000624852 397 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC127502.3-201ENST00000636170 1206 ntBASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VTA1Q9NP79 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
VTA1Q9NP79 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 SNORA70.10-201ENST00000384515 134 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 MIR506-201ENST00000384998 124 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 TIMM9P2-201ENST00000419324 266 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 RPL36AP15-201ENST00000444514 266 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC243772.1-201ENST00000451620 410 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 RPS27AP8-201ENST00000452665 445 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AL445669.2-201ENST00000454425 421 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 RN7SL481P-201ENST00000477764 299 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 RPL23AP72-201ENST00000492447 435 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 Y_RNA.655-201ENST00000515919 96 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 RNU6-1261P-201ENST00000517194 104 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC068993.1-201ENST00000546724 589 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 AC091946.2-201ENST00000606105 291 ntBASIC5.61□□□□□ -1.51
VTA1Q9NP79 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.61□□□□□ -1.51
VTA1Q9NP79 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VTA1Q9NP79 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC002525.1-201ENST00000624392 1622 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 GVINP1-202ENST00000531871 7271 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 RNU6-253P-201ENST00000384730 105 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 RPL23AP47-201ENST00000408017 460 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 BX510359.2-201ENST00000417920 305 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC016907.1-201ENST00000419483 435 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC009965.2-201ENST00000425328 970 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 MTCYBP39-201ENST00000437562 491 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 RPL12P26-201ENST00000452430 487 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 MTCO2P18-201ENST00000457151 658 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC092045.1-201ENST00000495716 1231 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 SETP14-201ENST00000497538 873 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 ATP1B1P1-201ENST00000509767 915 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms