Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 DPPA2P3-201ENST00000411853 655 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 USP9YP33-201ENST00000412220 421 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 UBE2V1P10-201ENST00000414685 269 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 BOLA3P4-201ENST00000418151 400 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AL133325.1-201ENST00000421090 382 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 CYCSP46-201ENST00000423569 204 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 MTCO3P21-201ENST00000430791 643 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 USP9YP35-201ENST00000435696 412 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 TMX2P1-201ENST00000436507 708 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 RPL35AP21-201ENST00000437667 333 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 RPL5P32-201ENST00000454085 879 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 MTCYBP1-201ENST00000454315 1119 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 RPL7AP52-201ENST00000458096 790 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC100832.1-201ENST00000471945 383 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 COPS8P2-201ENST00000473228 627 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC093270.2-201ENST00000486157 792 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 HMGB3P16-201ENST00000508037 287 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 HIGD1AP6-201ENST00000521833 279 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AP001207.1-201ENST00000524051 481 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 TRAV15-201ENST00000556680 249 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC138915.2-201ENST00000569776 97 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 RN7SL708P-201ENST00000580952 299 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 IMMP1LP3-201ENST00000604197 224 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC012360.2-201ENST00000609349 391 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 MIR6820-201ENST00000611508 62 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC022106.2-201ENST00000620114 757 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 MIR8080-201ENST00000622224 89 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AC006927.3-201ENST00000638789 384 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 CDR1-202ENST00000625883 1485 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC063976.2-201ENST00000425667 3556 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RNA5SP319-201ENST00000362768 119 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RNA5SP223-201ENST00000365174 120 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-1119P-201ENST00000384349 108 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-1215P-201ENST00000384441 102 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 MIR223-201ENST00000385204 110 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC013442.1-201ENST00000397347 228 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 HSPA8P15-201ENST00000401676 786 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AL139098.1-201ENST00000407291 389 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 U3.32-201ENST00000408116 212 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 MIR1284-201ENST00000408337 120 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 CFL1P1-202ENST00000432948 411 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 USP9YP29-201ENST00000445112 563 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 ST13P20-201ENST00000447996 1065 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC104634.1-201ENST00000452720 462 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 SNRPGP9-201ENST00000456025 225 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RN7SL189P-201ENST00000468631 289 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RN7SL184P-201ENST00000488308 297 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC109458.1-201ENST00000508858 316 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 AC011352.1-201ENST00000512300 793 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 MTCO1P30-201ENST00000515244 580 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-1261P-201ENST00000517194 104 ntBASIC4.85□□□□□ -1.63
AMBRA1Q9C0C7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms