Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AL158163.1-201ENST00000603915 1649 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM4Q9C037 OR5P1P-201ENST00000299512 925 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 RNA5SP124-201ENST00000362739 110 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 RNU1-18P-201ENST00000363062 164 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 RNA5SP130-201ENST00000364431 114 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 RNU6-328P-201ENST00000390887 106 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AL590704.1-201ENST00000402856 794 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 IFNNP1-201ENST00000429219 553 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC087650.1-201ENST00000431445 468 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AP000936.3-201ENST00000438127 255 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC010460.1-201ENST00000507087 466 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AP001804.2-201ENST00000533932 910 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC128687.2-201ENST00000609657 566 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC096577.2-201ENST00000611455 153 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC064801.1-201ENST00000612025 407 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AL021997.2-201ENST00000615674 271 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 MIR8059-201ENST00000620427 81 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC000123.2-201ENST00000623124 461 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC138907.10-201ENST00000623708 983 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC244205.2-202ENST00000635781 342 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
TRIM4Q9C037 RLIMP1-201ENST00000339626 1680 ntBASIC4.06□□□□□ -1.76
TRIM4Q9C037 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM4Q9C037 MIR331-201ENST00000362302 94 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 RPL30P2-201ENST00000414021 291 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AL050321.1-201ENST00000432363 400 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 RPL7P15-201ENST00000461190 712 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 RN7SL93P-201ENST00000463035 293 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC026427.2-201ENST00000506228 536 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 BTF3L4P4-201ENST00000506381 449 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC008802.1-201ENST00000519121 791 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC113403.1-201ENST00000604910 193 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 AL159169.3-201ENST00000608871 561 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC010809.3-201ENST00000621310 641 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC015722.2-201ENST00000622210 551 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 AC009452.1-201ENST00000640823 606 ntBASIC4.05□□□□□ -1.76
TRIM4Q9C037 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM4Q9C037 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM4Q9C037 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM4Q9C037 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM4Q9C037 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 NFYAP1-201ENST00000431953 972 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 RPL23AP52-201ENST00000439311 478 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC245517.2-201ENST00000442890 346 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 SERPINA7P1-201ENST00000443077 631 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AL500522.2-201ENST00000448562 343 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AL133244.1-201ENST00000456007 258 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 CEACAMP4-201ENST00000457676 421 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AL049830.2-201ENST00000480072 201 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 GAPDHP36-201ENST00000480688 918 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC006064.5-201ENST00000541782 248 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC037471.2-201ENST00000564941 598 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms