Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 IPO8P1-201ENST00000455509 3109 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AP004289.2-201ENST00000444413 1457 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AP002001.2-201ENST00000529025 1469 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 RNA5SP97-201ENST00000365006 84 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC007066.1-201ENST00000392902 381 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC091286.1-201ENST00000431233 461 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 HMGB3P10-201ENST00000434734 572 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 HMGB1P16-201ENST00000447155 540 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 RPL21P11-201ENST00000461458 483 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC093853.1-201ENST00000515689 483 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 RNU1-95P-201ENST00000516357 160 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 RNU1-128P-201ENST00000516704 160 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 MTCYBP19-201ENST00000517463 1124 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC008802.1-201ENST00000519121 791 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC018442.3-201ENST00000523025 183 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AP000889.1-201ENST00000530968 660 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AP000619.3-201ENST00000535634 1127 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AL390816.3-201ENST00000604527 1066 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AL592494.3-201ENST00000609485 464 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC117490.2-201ENST00000610042 594 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 AC027287.1-201ENST00000553115 1453 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 OR10AB1P-202ENST00000641219 1686 ntBASIC4.69□□□□□ -1.66
RPAP1Q9BWH6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 MIR483-201ENST00000385070 76 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 RPL21P17-201ENST00000397467 475 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 OR51A6P-201ENST00000418680 1004 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 RPL7P4-203ENST00000430239 730 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC096638.2-201ENST00000434965 711 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 CYCSP43-201ENST00000438233 310 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 RAB28P3-201ENST00000448325 597 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 RPL7P49-201ENST00000471402 708 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC147055.1-201ENST00000509261 750 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC008676.3-201ENST00000521237 435 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 FAM106CP-201ENST00000582212 507 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 FAM60CP-201ENST00000591086 664 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 MRPS35P3-201ENST00000603189 709 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AL139286.1-201ENST00000604465 483 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AC007179.3-201ENST00000604976 235 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AL135786.2-201ENST00000608422 615 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 AL606537.1-201ENST00000607258 2011 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 LINC00561-201ENST00000565815 2738 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 RLIMP2-201ENST00000427891 1563 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RPAP1Q9BWH6 MIR365B-201ENST00000362317 111 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 RNA5SP105-201ENST00000391123 113 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC104297.1-201ENST00000393779 870 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC091390.3-201ENST00000426478 338 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 IFNNP1-201ENST00000429219 553 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 Z74696.2-201ENST00000436514 498 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AL162388.1-201ENST00000450912 352 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AL133162.1-201ENST00000463228 453 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 UBE2CP3-201ENST00000502715 450 ntBASIC4.67□□□□□ -1.66
RPAP1Q9BWH6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms